Protein

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Genbank accession
BCM29526.1 [GenBank]
Protein name
uncharacterized protein
RBP type
TF
Evidence RBPdetect
Probability 0,91
Protein sequence
MSNNTINHVSDASVYVTFDPTGTQWPSTYKNVQQALAVIGSWARTDVGLPVAAPGFRGIAAIATQAQIDDGTDNTTIVTPALLQYRLQNPHASQIVWGYTRYATDAESVTASNDLVTITPRSLNYVFNNRKSTETVWGSAKLSTTAQATSGTDDTTAMTPLKVRQAISALVPVQSNATESSFGLVQLATVAEVRAGTIRDGFAISPYTFIRLTASESDLGLLRIATQAEVNAGTDNTKAITPQKLAAVKGSGSAFGMVKLTTDINTGLANTALSAGANVVPSNKNSAITGGALYQGSISADNKYQTKTEVDANIPIGCMMLAAFNADVGNLFICNGRAMNRNSNPELFARIGYTYGGAGDIFNLPDMRGVAARGFDAGRGLDPGRGFGTYQADMFAYHEHDLQMVYQNGGNLPASLVQYELKSAVKNDQMLRHLNNQYSKALGTGGNETRMKNVAVNYVIRVR
Physico‐chemical
properties
protein length:463 AA
molecular weight: 49283,67910 Da
isoelectric point:8,34796
aromaticity:0,07559
hydropathy:-0,17646

Domains

Domains [InterPro]
DC_0176
STR
1–440
DC_0176
IPR037053
ATT
303–368
IPR037053
SSF88874
STR
306–462
SSF88874
IPR011083
ATT
317–370
IPR011083
BCM29526.1
1 463
Architecture
STR
ATT
STR
STR 1-302 | ATT 303-370 | STR 371-462 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterobacter phage vB_EkoM5VN
[NCBI] 		2771379 Uroviricota > Caudoviricetes > Pantevenvirales > Pseudotevenvirus > Pseudotevenvirus leb
Host Enterobacter kobei
[NCBI] 		208224 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BCM29526.1 [NCBI]
Genbank nucleotide accession
LC589952 [NCBI]
CDS location
range 167467 -> 168858
strand +
CDS
ATGAGTAACAACACAATTAACCACGTAAGCGATGCGTCAGTTTATGTGACTTTTGATCCTACGGGTACGCAATGGCCTAGCACGTATAAAAACGTCCAACAGGCTCTTGCTGTTATCGGTAGTTGGGCGCGTACTGATGTTGGTTTGCCTGTTGCTGCTCCTGGCTTCCGTGGTATAGCCGCGATCGCGACACAGGCGCAAATTGACGATGGTACTGATAACACAACGATTGTTACCCCTGCATTGCTGCAATATCGTTTACAGAACCCTCATGCTTCACAAATCGTATGGGGATACACTCGCTATGCAACTGATGCCGAATCGGTAACTGCTTCGAACGATCTGGTAACTATTACCCCTCGTTCGTTGAATTACGTGTTCAATAACAGAAAATCAACAGAAACCGTGTGGGGTTCTGCTAAACTGTCAACTACTGCTCAGGCAACGTCCGGTACTGATGACACGACCGCAATGACTCCGCTGAAAGTGAGGCAAGCGATCTCTGCTCTGGTTCCGGTACAATCCAATGCAACAGAAAGTTCATTTGGTTTGGTTCAGTTGGCTACCGTCGCAGAAGTCCGCGCAGGTACAATCCGTGATGGATTTGCTATTTCACCATACACATTTATTCGTCTGACTGCAAGCGAAAGTGATTTAGGTTTACTCCGTATCGCTACCCAGGCAGAAGTAAACGCGGGTACTGATAACACCAAAGCAATCACCCCGCAAAAACTCGCTGCTGTGAAAGGTTCCGGTTCTGCATTTGGTATGGTTAAATTAACAACAGATATCAATACCGGATTAGCAAATACCGCTTTGTCTGCTGGTGCTAACGTAGTACCAAGCAATAAAAACAGCGCAATCACTGGTGGTGCATTGTATCAGGGTTCGATTAGTGCTGACAATAAATACCAGACAAAGACAGAAGTTGACGCAAACATCCCGATCGGATGTATGATGCTTGCAGCGTTTAACGCCGATGTTGGTAACTTGTTTATCTGTAACGGGCGAGCGATGAACCGCAATTCAAACCCAGAACTGTTTGCTCGAATTGGTTACACATACGGCGGTGCTGGTGATATTTTCAACTTACCTGATATGCGCGGTGTTGCTGCTCGCGGATTTGATGCTGGACGTGGTTTAGATCCAGGTCGCGGGTTTGGTACATACCAAGCGGACATGTTCGCATATCACGAACACGATCTCCAGATGGTATATCAGAACGGTGGAAACCTTCCAGCAAGTCTAGTTCAGTACGAACTAAAAAGCGCAGTGAAGAATGACCAGATGCTTAGACACTTGAATAACCAATACAGTAAAGCGTTAGGAACTGGCGGAAACGAAACACGAATGAAAAACGTTGCGGTCAACTATGTAATTCGAGTACGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f826c173b3b8a33a747245e99a58eb02fc85e253bfaa2ea9f769dd428c86da69
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7291
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and genome structure of virulent phage vB_EkoM5VN to control Enterobacter kobei M4-VN isolated from plant soft rot Thanh,N.C., Fujino,Y., Iiyama,K., Hiromasa,Y., Iwamoto,T. and Doi,K. 2020-06-03 — GenBank