Protein

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Genbank accession
QSM02625.1 [GenBank]
Protein name
lysin A
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MVVLMAVLRTNVEFAKRIFQDRVGNDYVYGGNWNPFNLKVGTDCSGLVIDICDAVRNGTAMAWTRHGMSTESWRPIEVGQTGTIFNTICVASPNDFPADAAVKIAIHHGPGGGANSHMWCEVEGIRMESNGSDGCVTGNQARSVYDTSYANDWHYLPGPITGQVGVDPAGVLARATGLSVARASQILPAVSDGLKASQCTNVNRIAMWLAQVGHESAGFNATEEYASGAAYEGRADLGNTQPGDGVRFKGRSWIQITGRNNYAAFSRWCSGKGLVLSPTEFVDNPNRLAELRWAGIGAAWYWTVARPDINALSDRQDLETVTRRINGGTNGLADRRDRYNRALLQGDALLQLLTEPLDPIEELLMSDLQVESLSIYATPGEPLIPIVRMVQAIDAAEHRKLVEDWARTGDADALSRIARTAAGQGKFRDAATIAHAKAVLADIEATNPAVLQEFISQKGQS
Physico‐chemical
properties
protein length:461 AA
molecular weight: 49801,36010 Da
isoelectric point:5,47737
aromaticity:0,07375
hydropathy:-0,21258

Domains

Domains [InterPro]
DC_1733
ATT
1–165
DC_1733 G3DSA:1.10.530.10
IPR023346
STR
193–343
IPR023346
IPR052354
Unmapped
197–342
IPR052354
IPR023346
STR
200–335
IPR023346 DC_1763
QSM02625.1
1 461
Architecture
ATT
RBD
STR
RBD
ATT 1-165 | RBD 179-192 | STR 193-343 | RBD 344-461
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QSM02625.1
1 461
Domain Start End Length (AA) Confidence
N-terminal 1 168 168 0,3286
Central domain 169 367 200 0,5738
C-terminal 368 461 93 0,6640
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-168
Central
169-367
C-terminal
368-461

Taxonomy

  Name Taxonomy ID Lineage
Phage Mycobacterium phage prophiGD57-2
[NCBI] 		2813271 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QSM02625.1 [NCBI]
Genbank nucleotide accession
MW584164 [NCBI]
CDS location
range 53199 -> 54584
strand +
CDS
GTGGTCGTACTGATGGCCGTGCTACGTACGAACGTCGAGTTCGCAAAGCGGATCTTCCAAGACCGTGTCGGCAACGACTACGTCTACGGCGGGAACTGGAATCCGTTCAACCTTAAGGTCGGCACCGACTGCTCCGGTCTCGTCATCGATATCTGTGATGCGGTGCGCAACGGGACCGCGATGGCCTGGACTCGGCATGGGATGTCCACCGAGAGCTGGCGTCCGATTGAAGTAGGGCAGACCGGAACCATCTTCAACACCATATGCGTTGCGTCGCCGAACGACTTTCCGGCTGATGCTGCGGTGAAGATCGCCATCCACCACGGCCCTGGCGGTGGAGCGAATAGCCACATGTGGTGTGAGGTTGAGGGAATCCGCATGGAGTCCAACGGCTCCGATGGGTGTGTGACCGGGAACCAGGCGCGGTCCGTGTACGACACGAGCTATGCGAACGACTGGCACTACCTGCCCGGACCCATCACAGGCCAGGTAGGTGTCGATCCCGCAGGAGTGCTGGCACGTGCCACCGGGCTAAGTGTCGCGAGGGCTTCGCAGATCCTACCCGCGGTGTCGGACGGGCTCAAGGCTAGTCAGTGCACGAACGTCAATCGGATCGCGATGTGGCTGGCGCAGGTCGGCCACGAGTCAGCCGGCTTCAATGCCACCGAAGAGTATGCCTCCGGTGCCGCCTATGAAGGGCGTGCAGATCTGGGTAACACCCAACCCGGGGATGGGGTGCGGTTCAAGGGCCGCAGCTGGATTCAGATCACCGGCCGCAACAACTACGCAGCGTTCTCGCGGTGGTGTTCGGGTAAAGGACTCGTTCTGTCGCCAACGGAATTCGTTGATAACCCGAACCGACTGGCCGAACTGCGGTGGGCCGGTATAGGTGCGGCTTGGTACTGGACGGTCGCCCGCCCGGACATCAACGCCCTGTCGGATCGGCAGGACTTAGAGACCGTCACGCGCCGAATCAACGGCGGCACCAACGGCTTGGCTGATCGTCGCGACCGATACAACCGCGCCCTACTCCAGGGCGATGCGCTTCTGCAACTACTCACTGAACCGCTGGACCCGATTGAGGAGCTACTGATGTCAGACCTTCAGGTCGAATCCCTATCCATCTACGCCACCCCAGGTGAGCCGTTGATCCCGATTGTTCGCATGGTGCAGGCCATCGACGCCGCGGAGCACCGCAAGCTCGTCGAGGACTGGGCGCGCACCGGGGATGCAGACGCACTATCCCGTATCGCCCGCACCGCGGCGGGGCAAGGGAAGTTCCGTGACGCCGCCACCATCGCACACGCCAAAGCCGTGCTCGCTGACATTGAAGCCACTAACCCTGCAGTCCTGCAGGAGTTCATCTCTCAGAAGGGACAATCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
7d1071115e163a7f9c92338287194d546191ddd34e591cde999e9890a0c685ed
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8271
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50