Protein

View in Explore
Genbank accession
UXD83528.1 [GenBank]
Protein name
virion structural protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MITFLPLDLKAKLASNYIVDEDHTLIQVANKTHRVLMCTHGGFYTKDFNLRDKKTGLSLNKDQYKTTYLYSQLSEMTGLEVMGIVVVTDPKVSPNVQVTYRAVGGFFSISALELKAVFDKLELDELSFTWDDIIGKPDAYPPAPHGHEYWQIYGTDTMVTELNRIAHAYRVGRSAMDNAADDYYKVYLTDAKTAVDDYRDRVTAHLTDYNNPHADDRFKLIPPLDKISNWGFATEAESVNRNVNNKYMPIGGIYRILNIDTLAKLAAHIKNFNNPHVVTADQVGSYTKPVMDSKIAPLLGVNEQAANATTIGATTNSQGYPVTGTGKVYQNFWNDVRKDIPAEEVTSGVFKWNALGKGNASILNDPERYYLASDGTWQDWVEAFKEWNKDKIKAITLGQVNSEAEALNTLNTMFTDNTKYPEGTYAVVGVRTNTPFEAYYYQQYVAVRNNGTWRWMIRAGALV
Physico‐chemical
properties
protein length:463 AA
molecular weight: 52127,06030 Da
isoelectric point:5,84688
aromaticity:0,11447
hydropathy:-0,39611

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Koomba boorn-mokiny kep-wari Wadjak 2
[NCBI] 		2979353 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UXD83528.1 [NCBI]
Genbank nucleotide accession
OP310984 [NCBI]
CDS location
range 96655 -> 98046
strand -
CDS
ATGATTACTTTTTTACCATTAGATCTAAAAGCTAAATTGGCTTCTAATTACATTGTAGATGAGGACCACACACTCATTCAAGTTGCTAATAAAACACACCGCGTACTTATGTGTACACATGGTGGTTTTTATACAAAGGACTTTAATCTACGTGATAAGAAGACTGGCTTATCTTTAAACAAAGATCAATATAAAACAACCTATCTTTATTCACAGTTATCTGAAATGACTGGCTTAGAAGTAATGGGTATTGTTGTAGTAACTGATCCTAAGGTTAGTCCTAATGTCCAAGTTACATATAGAGCAGTTGGTGGTTTCTTTAGTATTTCGGCATTAGAACTTAAAGCTGTTTTTGATAAACTTGAATTAGATGAATTAAGTTTCACTTGGGATGATATTATTGGTAAACCCGATGCATATCCGCCTGCACCTCACGGCCATGAATATTGGCAGATTTATGGCACAGATACAATGGTAACTGAATTAAACCGAATAGCACACGCTTATCGGGTCGGTAGAAGTGCCATGGATAATGCTGCCGATGATTATTATAAAGTTTATCTCACCGATGCAAAAACTGCTGTGGATGATTATAGAGATCGAGTTACAGCACACTTAACTGATTATAATAATCCGCATGCTGATGATCGATTCAAGTTAATTCCACCGCTTGATAAGATATCTAACTGGGGTTTTGCTACTGAGGCTGAGTCAGTTAATAGAAATGTAAATAATAAATACATGCCAATTGGTGGTATTTATCGTATTCTTAATATTGATACATTGGCTAAACTTGCAGCACATATTAAAAACTTCAATAACCCACACGTTGTCACAGCTGACCAAGTTGGATCATATACCAAACCAGTGATGGATTCTAAAATAGCTCCATTATTAGGTGTCAATGAACAAGCTGCTAATGCGACCACTATTGGTGCTACTACTAATAGTCAGGGTTATCCAGTTACTGGAACAGGTAAGGTATATCAGAATTTCTGGAATGATGTTCGAAAAGATATTCCAGCTGAAGAAGTAACTAGTGGCGTATTTAAATGGAATGCATTAGGTAAAGGTAATGCATCAATATTAAATGACCCTGAGAGATATTATCTAGCAAGCGATGGTACTTGGCAAGACTGGGTTGAAGCTTTTAAAGAGTGGAACAAAGATAAGATTAAAGCCATTACCTTAGGTCAGGTAAATAGTGAAGCAGAAGCATTAAACACGTTAAATACGATGTTTACAGATAATACCAAATATCCTGAAGGCACTTACGCTGTTGTAGGTGTTAGAACTAATACCCCCTTTGAAGCCTATTATTACCAGCAATATGTAGCAGTTAGAAATAATGGTACATGGCGTTGGATGATTCGAGCTGGAGCACTTGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
576ef1d1e051368e8608208cf3f22cc3c74d00cfb8cd50667e6836f78e9cb39f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6330
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequences of Four Pseudomonas aeruginosa Bacteriophages: Kara-mokiny 8, Kara-mokiny 13, Kara-mokiny 16 and Boorn-mokiny 1 Vaitekenas,A., Tai,A.S., Ramsay,J.P., Stick,S.M. and Kicic,A. — — GenBank