Protein

View in Explore
Genbank accession
QKW95239.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MTPNNNLSVLPFYEGVQYQDYKKSYAYGDVYPLFTPINKLLPFQIIRPTRSNNIVSVRLYDYKFTRMLADITTPMLETGLQIVRFANYGYDVIVYPGLLPMALDFPEGRYMIGINDGVQWYYSDVFTWISGGMDGYLCVEWSDAANMEVDGGQIVYEGVQFKNRVYVCSELGKPEYKFEEEGEERDGYFFPEKQISEKTFRFIFLAPEYLCDVMRLIRMSDFVTVYSQGRKYDCDTFLITPKWQTQGNLASVECEFECATVVKKIGRGVIPTTGGDYNKDFNNDFNNNDVS
Physico‐chemical
properties
protein length:291 AA
molecular weight: 33651,76170 Da
isoelectric point:4,61887
aromaticity:0,15808
hydropathy:-0,29175

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QKW95239.1
1 291
Domain Start End Length (AA) Confidence
N-terminal 1 13 13 0,8966
Central domain 14 214 202 0,1857
C-terminal 215 291 76 0,4109
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-13
Central
14-214
C-terminal
215-291

Taxonomy

  Name Taxonomy ID Lineage
Phage Parabacteroides phage PDS1
[NCBI] 		2709316 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QKW95239.1 [NCBI]
Genbank nucleotide accession
MN929097.1 [NCBI]
CDS location
range 39927 -> 40802
strand +
CDS
ATGACACCGAATAATAATTTGTCCGTATTGCCGTTTTACGAGGGCGTGCAATACCAAGATTATAAAAAATCGTATGCGTATGGCGACGTTTACCCGTTGTTTACGCCTATCAATAAACTATTGCCGTTTCAAATCATACGCCCGACCCGTTCAAATAACATTGTATCGGTTCGGTTGTATGATTATAAATTTACCCGGATGTTAGCGGACATAACAACGCCGATGTTGGAAACCGGATTGCAGATTGTCCGGTTTGCAAATTATGGTTATGATGTTATTGTTTATCCCGGTTTATTGCCGATGGCTTTAGATTTCCCGGAAGGGCGTTATATGATTGGAATTAACGACGGCGTACAATGGTATTATTCCGATGTATTTACGTGGATTTCCGGCGGAATGGACGGTTATTTGTGCGTTGAATGGAGCGATGCCGCCAATATGGAGGTTGACGGCGGACAAATCGTTTACGAGGGCGTGCAATTCAAAAACCGAGTTTACGTATGTTCGGAGTTGGGAAAGCCGGAATACAAGTTTGAGGAAGAGGGCGAAGAACGGGACGGGTATTTTTTCCCGGAAAAACAAATATCAGAAAAGACGTTCCGGTTTATCTTTTTAGCCCCCGAATACCTTTGCGACGTAATGCGGTTAATCCGTATGAGTGATTTTGTAACGGTATATAGTCAAGGCAGGAAATACGATTGCGACACGTTTCTAATTACCCCCAAATGGCAAACACAGGGCAATTTGGCGTCCGTCGAATGTGAATTTGAATGCGCAACCGTGGTTAAGAAAATCGGACGGGGCGTTATACCAACGACCGGGGGCGATTACAACAAAGACTTTAATAATGATTTCAATAACAATGATGTTAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0c73e0cdfd6c3a1e5ef79f4c7bd7307b4b270f782984e8c6bccde8e081caaad8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5969
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of a novel Parabacteroides distasonis bacteriophage isolated from the human gut Guerin,E., Shkoporov,A.N., Stockdale,S.R., Clooney,A.C., Draper,L.A., Ross,R. and Hill,C. 2024-01-04 — GenBank