Protein

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Genbank accession
WYV70536.1 [GenBank]
Protein name
putative baseplate wedge protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MSFMKYLHPLWKTRLTKDSNPHNVVLASLDDMLKSVATDAMDSKKDARLETATGQWLDEFGDKFGVFRKDNEDDNTYRQRIINFILIERGTVISIEDAIKKYLNDPTTKVEIYEPYKNVFILNKSKLNGEDRLLGKYYTTAVIDARFTENVPLDVLSEIEKFKPAGVKAQLSRLPNRENEDATPIEKKIINSRNLLVKTKEYSGNDDPWSYNPTTVQVMTKRYMGTKMIQTNVNWGSIRYNIPSIVNRGALKVGDTVTYSQSVRLTNNSIVNGNFATGVLSPFTISGGNNLNIEQDASYGSVATLRATGLPGNFYHGMRQNLTEGNLTKIEVGQKYRVRFLYRINSDIAIDEGAAVEIKGTTSGGASANPLPIQEILDKSQVGRWVEFSKDMTATATVDNPAIILWLRRNGSISFFDIELTRLDTIVPMPVKFFSEGSSMGGTVVGNATANWQMLSVTLPIEQNGLDNNAKLRFEVDQLTGTGNWFQTAAQTLVKGDKPLMYTEAPEDTGKNTADFDIQDKIKQIFDSRDKTYLRLVDYDIIGYKRVDRIIPVKPVLGTPVKPYPTLVYGGVSYYMVPIDKIKAEDATMLYYQTTIKGGTFENKQYMRRDIDVIPTFSNGYKDTHTPSDLTKEGSIQVFETFKTFTKNKVLYSGAVNVFPRLPSDNDRPATETIRGINVNTFWNQDYLGMTCTRFNDSAFQLGSYESGLQGFKLGDKVTLSADVLCDVPGAYLSFWFNDGKNWIEYSRDFTMETNNWSRLNHTQTIPANALLCMWRIYFPRVEAALGKNLRIKNICINKGDPIPYEDGNSTQKRGDNLDIIEEFIIDIKNK
Physico‐chemical
properties
protein length:831 AA
molecular weight: 93823,25980 Da
isoelectric point:6,99190
aromaticity:0,10108
hydropathy:-0,42816

Domains

Domains [InterPro]
IPR060691
STR
23–115
IPR060691 G3DSA:2.60.120.260 DC_1278 IPR058040
G3DSA:2.60.120.260
STR
264–422
G3DSA:2.60.120.260 DC_1964
WYV70536.1
1 831
Architecture
STR
STR
TAS
STR
STR 23-115 | STR 250-538 | TAS 540-610 | STR 611-805 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WYV70536.1
1 831
Domain Start End Length (AA) Confidence
N-terminal 1 389 389 0,6010
Central domain 390 645 257 0,4547
C-terminal 646 831 185 0,2944
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-389
Central
390-645
C-terminal
646-831

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage Vp4
[NCBI] 		2952612 Viruses > unclassified bacterial viruses >
Host Bacillus thuringiensis
[NCBI] 		1428 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WYV70536.1 [NCBI]
Genbank nucleotide accession
PP554288 [NCBI]
CDS location
range 1 -> 2496
strand +
CDS
ATGAGCTTTATGAAATATTTACATCCTCTATGGAAAACAAGATTAACAAAGGACAGCAACCCACATAATGTTGTCCTTGCTTCCTTAGATGATATGTTAAAGAGCGTGGCTACTGATGCAATGGATAGTAAAAAGGACGCGCGATTGGAAACAGCTACCGGACAATGGTTAGACGAGTTCGGAGATAAGTTCGGCGTATTTCGTAAGGATAATGAAGACGACAACACATACCGACAACGAATTATTAATTTCATTCTTATCGAAAGAGGTACAGTCATCTCTATCGAAGATGCGATTAAGAAATACTTAAATGACCCGACAACTAAGGTCGAGATTTACGAGCCTTACAAGAACGTGTTTATCTTGAACAAATCGAAACTAAATGGTGAAGACCGCTTACTAGGTAAGTACTACACAACAGCCGTTATCGATGCTAGATTCACAGAGAATGTCCCGTTAGATGTTTTAAGTGAAATCGAAAAGTTCAAACCAGCCGGAGTTAAAGCGCAGCTATCTCGATTACCGAATAGAGAAAATGAAGATGCGACTCCTATTGAAAAGAAAATCATTAACTCTCGTAACCTGTTAGTTAAAACGAAAGAATATTCTGGTAATGATGACCCGTGGAGTTATAACCCAACCACCGTACAAGTTATGACGAAACGTTATATGGGAACAAAAATGATACAGACAAATGTTAACTGGGGTAGTATTCGATACAACATTCCTAGCATTGTAAATAGAGGGGCATTAAAAGTAGGAGACACTGTTACGTATTCTCAATCTGTACGATTAACAAATAACTCTATTGTTAACGGTAACTTCGCTACAGGAGTACTAAGTCCATTTACAATATCAGGCGGTAACAATCTTAATATTGAGCAAGACGCGTCTTATGGTAGTGTCGCTACACTCCGCGCTACTGGTCTTCCCGGAAACTTCTACCACGGAATGCGACAAAATTTGACAGAAGGTAACCTAACTAAGATAGAAGTAGGTCAGAAGTATCGAGTGAGATTCCTTTATAGAATTAATAGCGATATAGCTATCGACGAAGGTGCCGCAGTAGAAATTAAAGGTACAACGTCAGGTGGAGCCTCCGCTAACCCTTTACCTATACAAGAAATTCTTGATAAAAGCCAAGTAGGTAGATGGGTGGAGTTCAGCAAAGATATGACCGCTACCGCTACAGTAGATAACCCTGCTATTATCCTATGGCTTAGAAGAAATGGTAGTATATCCTTCTTTGATATAGAGCTGACTAGGCTCGACACAATTGTACCTATGCCTGTCAAGTTCTTTTCAGAGGGGAGTTCAATGGGTGGTACAGTCGTAGGTAACGCCACAGCTAATTGGCAAATGCTTAGTGTCACGCTACCAATTGAGCAGAATGGTCTAGATAATAATGCAAAACTACGATTCGAAGTAGACCAACTAACAGGTACAGGTAACTGGTTCCAAACAGCAGCTCAAACCTTAGTTAAGGGTGACAAACCTCTCATGTACACCGAAGCACCAGAGGACACAGGAAAAAACACCGCTGACTTCGATATCCAAGATAAAATCAAGCAGATATTCGACAGCAGGGACAAAACGTACTTAAGATTAGTAGATTATGATATAATAGGTTATAAGAGGGTTGACAGAATAATCCCTGTGAAACCTGTACTTGGTACGCCTGTTAAACCATATCCTACACTAGTATATGGTGGAGTATCGTACTACATGGTTCCTATCGACAAGATTAAAGCAGAAGACGCGACTATGTTATATTACCAAACTACAATTAAAGGCGGTACGTTTGAAAATAAACAATATATGCGTAGAGATATCGATGTAATCCCTACATTCTCGAATGGGTATAAAGACACTCATACACCTTCTGATTTAACGAAAGAGGGTTCAATCCAAGTTTTCGAAACATTCAAAACATTCACAAAAAATAAAGTACTGTACAGTGGCGCGGTTAATGTATTTCCTCGATTACCTTCGGATAATGACAGACCAGCTACAGAGACAATACGAGGTATTAATGTAAACACTTTCTGGAATCAAGACTACTTAGGAATGACGTGTACACGATTTAACGACTCTGCATTCCAACTAGGTTCTTATGAAAGCGGGTTACAAGGGTTCAAACTAGGAGATAAAGTCACATTATCCGCAGATGTTTTGTGTGACGTACCCGGAGCTTATTTATCATTCTGGTTTAATGATGGTAAGAACTGGATTGAGTACTCACGAGATTTTACAATGGAGACAAACAATTGGAGTAGGTTGAACCATACGCAAACAATACCTGCAAACGCTTTACTATGTATGTGGAGAATTTACTTCCCTCGTGTAGAAGCAGCGTTAGGTAAGAACTTGCGGATTAAAAACATCTGTATAAACAAAGGTGACCCGATACCGTATGAAGACGGGAACTCGACACAAAAACGTGGAGATAATTTAGATATCATCGAAGAGTTTATTATCGATATCAAGAATAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f3f67a1c2f7283a1945bec08466ecc8181794b3ac0dfc45af9363cade11db26c
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2941
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Deciphering the adsorption machinery of Deep-Blue and Vp4, two myophages targeting the Bacillus cereus group Nuytten,M., Leprince,A., Gillis,A. and Mahillon,J. 2024-09-17 — GenBank