Protein

View in Explore
Genbank accession
YAF82154.1 [GenBank]
Protein name
long tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,72
TF
Evidence RBPdetect2
Probability 0,83
Protein sequence
MSPKTAGVGKAGKARLFGTFGDATLPDLSPRLVATLRAGFDAGAWGREYVDVCLNDGTNNDAASDAKQKRVARFASGGRVLIGERADDGKTALQVRGGVDASEGVAARAIDAGGAGGQFRAVYDGYGAFIRNDGRSVYFLSTPKGAPDGGFNDYRPFSWSLSTGQVIVDGSGAGTVFGGAVDVARDLEVGRQASEGHIKLGPVDGYLYANPVSTGWWSPAGSSYQYIFADHTFRIDGRMAWHEGNLDPLDKSKGGMLAGDVSFAPGKRLVLAEGSPAAPSLTFANDGAPDTGLYHAADGEFGVTCNGRAVVRFSPALVTFEQPVTVPTPPAADRSTRAATTEWVRTVLSATTIGQIVFEPRTTVRPGFLKANGVLVNRADYPELWAYAQASGALVSDADWMKDRWGCFSTGDGATTFRLPELRGEFIRCWSDARGGVDATRQIGAFQGDQNHTHAHGAAASEAPDHVHTAWTDVQGWHGHHGWTNAVGDHQHVSPWGEHPQMYNPPWGTWGAANNRGAEGSDNDNVYGMTSPAGNHNHEFNTEGNGNHGHAVGIGGGGRHAHTIAVQPDGGDEARPRNVALLALIRAY
Physico‐chemical
properties
protein length:588 AA
molecular weight: 62048,52440 Da
isoelectric point:5,94504
aromaticity:0,09354
hydropathy:-0,38878

Domains

Domains [InterPro]
DC_0932
STR
2–261
DC_0932 SSF88874
IPR048390
ATT
93–157
IPR048390 DC_0350
IPR037053
ATT
350–429
IPR037053
YAF82154.1
1 588
Architecture
STR
ATT
STR
ATT
STR
STR 2-92 | ATT 93-157 | STR 158-349 | ATT 350-429 | STR 430-588
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Burkholderia phage vB_CBP45a
[NCBI] 		3461025 Viruses >
Host Burkholderia pseudomallei
[NCBI] 		28450 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YAF82154.1 [NCBI]
Genbank nucleotide accession
PX105056.1 [NCBI]
CDS location
range 27215 -> 28981
strand -
CDS
GTGTCGCCGAAGACGGCCGGCGTCGGCAAGGCCGGCAAGGCGCGCCTGTTCGGCACGTTCGGCGACGCGACGCTGCCCGATCTGAGCCCGCGCCTGGTCGCGACGCTGCGCGCGGGATTCGACGCCGGCGCGTGGGGGCGCGAGTACGTCGACGTTTGCCTGAACGACGGCACGAACAACGATGCGGCGAGCGACGCGAAGCAGAAGCGCGTCGCACGCTTCGCGTCGGGCGGCCGCGTGCTGATCGGCGAGCGCGCGGACGACGGCAAGACCGCGCTGCAGGTGCGCGGCGGCGTCGACGCATCGGAAGGCGTCGCCGCACGCGCGATCGACGCCGGCGGCGCCGGCGGGCAGTTCCGCGCCGTGTACGACGGCTACGGCGCGTTCATCCGCAACGACGGCCGGAGCGTCTATTTCCTGTCGACACCGAAGGGGGCCCCGGACGGCGGCTTCAATGACTATCGGCCGTTCTCGTGGTCGCTGTCGACAGGGCAGGTGATCGTCGACGGCAGCGGAGCGGGCACGGTCTTCGGCGGCGCCGTGGACGTCGCGCGCGACCTCGAAGTCGGTCGGCAGGCAAGCGAAGGGCATATCAAGCTCGGGCCGGTCGACGGCTACCTCTACGCGAACCCGGTCAGCACCGGTTGGTGGTCGCCGGCGGGATCGTCCTATCAGTACATCTTCGCCGATCACACGTTTCGCATTGACGGGCGGATGGCGTGGCACGAAGGCAATCTCGACCCGCTCGACAAGAGCAAGGGCGGCATGCTGGCCGGCGATGTGTCGTTCGCGCCGGGCAAGCGGCTCGTGCTCGCCGAAGGTAGCCCGGCCGCGCCGTCGCTCACGTTCGCCAACGACGGCGCGCCGGATACCGGCCTCTATCACGCAGCCGACGGCGAGTTCGGCGTGACCTGCAACGGGCGCGCCGTCGTGCGGTTCTCGCCGGCGCTCGTGACCTTCGAGCAACCCGTGACCGTGCCGACGCCGCCGGCGGCGGATCGATCGACGCGCGCCGCGACGACGGAATGGGTGCGCACGGTCCTGTCGGCGACGACGATCGGCCAGATTGTCTTCGAGCCGCGCACGACCGTGCGGCCGGGCTTCCTCAAGGCGAACGGCGTGCTCGTGAACCGTGCCGACTATCCCGAGCTGTGGGCGTATGCGCAGGCGAGCGGCGCGCTCGTCTCCGATGCGGACTGGATGAAGGATCGGTGGGGCTGTTTCTCGACCGGCGACGGCGCGACGACGTTTCGCCTGCCCGAGCTGCGCGGCGAATTCATTCGTTGCTGGTCCGATGCGCGCGGCGGCGTCGACGCGACGCGCCAAATCGGCGCCTTCCAGGGCGACCAGAACCACACGCACGCACACGGCGCCGCGGCAAGCGAAGCGCCGGACCACGTCCACACCGCGTGGACCGACGTGCAGGGCTGGCACGGCCACCACGGTTGGACGAACGCTGTCGGCGACCACCAGCACGTCTCGCCGTGGGGCGAGCACCCGCAGATGTACAACCCGCCGTGGGGCACGTGGGGCGCAGCCAACAACCGCGGCGCGGAGGGCAGCGACAACGACAACGTGTACGGGATGACGAGCCCGGCCGGCAACCACAACCACGAGTTCAACACCGAAGGCAACGGCAATCACGGGCACGCCGTCGGTATCGGCGGCGGTGGCCGGCACGCGCACACGATCGCCGTTCAACCCGACGGCGGCGACGAAGCGCGCCCGCGCAACGTCGCGCTGCTCGCGCTGATTCGCGCCTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6e9f3d772b24b756f83c24e86913b2c0f23cecd026ff9e23e405c4ac41b0bd4f
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8089
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50