Protein
View in Explore- Genbank accession
- XCO36048.1 [GenBank]
- Protein name
- tail fiber protein
- RBP type
-
TFTSPTSPTSP
- Protein sequence
-
MSSDIIPYKSSLLPEKIGNFYGCVFKNLYVSTARYCCVRLHIDWCQWIGGTISNNGRWTSSVSGQQCDYYLIETGHGFHCSGAYLSIPAYNPTERKPNKSVIATAARGSVYSACYMEDTPSYVTILNKWWNDGNEKGFGLNIDCIGSQYRPDRTYKYLTFEEGAFGYYDENENWVPPAGYGSYPSTNGIDFVRFGSPTHDTGAFPHGGFDFKYGTYGVMYSTNTTYTEPPDVDSMRGHKTTKEMFSPYGLMAANGILQLPVLSPAMHSNICIWYKDLTGSFDLSNIAIWTNANIDQNSADAGYNQNLFFARAEMAIDYGNGYKMAIIQNLKWNNNDGVGTAGSQQSLQFTIPDTTPIILKAVQAFTGGIPVFPVGLDYRPETSDLCVWGHVNPSNGFKYNLFKKVGGGIFMPEDVIYPWTAHQRANTDYKFATTVYEDYGFTNLPLIIKGGNSIGAFFAKEFTVSIVAVDSTNGRTTVDVPAAYKPYVFMGVPLKITGGSSTGYTGEVRIHKRNLKTDGTLSGQYVLDAVVGTVGDTLNINQRTLTARTYRRDYTADALTANGSFTLRGTTMRFGYNAGSTGTRAVEFYVGGATTKSADITAYGTSIGLNASSLVFGGNIGFSATNTWDIGSSGNTVKNIYTQNAVTVVSDRDHKPVQEGIPDNILDIWGTIGIKRFKYDWAIAEKGEDAARWHVGYIAQDIIEAFEAAGEDATKWALVVRNEWPAEDEVVEAWDDEYETIPAQYDAQGQKISEETQVLVRQAGSRVVKEAIPAGGEWRLVMDECNAMEAAYQRRRLDRIEAAITDGKG
- Physico‐chemical
properties -
protein length: 809 AA molecular weight: 89138,48320 Da isoelectric point: 5,25422 aromaticity: 0,12485 hydropathy: -0,31520
Domains
Domains [InterPro]
IPR036388
RBD
630–806
RBD
630–806
IPR036388
RBD
637–806
RBD
637–806
cd10144
CHP
650–796
CHP
650–796
IPR030392
CHP
650–807
CHP
650–807
IPR030392
CHP
650–710
CHP
650–710
1
809
Architecture
RBD 630-807 |
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
809
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 10 | 10 | 0,0059 |
| Central domain | 11 | 291 | 282 | 0,9923 |
| C-terminal | 292 | 809 | 517 | 0,5254 |
Note: Constraints were applied during segmentation.
Sequence started with non-N-terminal domain|N-terminal too short, forced to 10 residues
Sequence started with non-N-terminal domain|N-terminal too short, forced to 10 residues
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-10
1-10
Central
11-291
11-291
C-terminal
292-809
292-809
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Klebsiella phage KP2025 [NCBI] |
3233247 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host |
Klebsiella pneumoniae [NCBI] |
573 | cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales |
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
XCO36048.1
[NCBI]
Genbank nucleotide accession
PP919962.1
[NCBI]
CDS location
range 23952 -> 26381
strand +
strand +
CDS
ATGTCCAGCGACATTATCCCCTACAAGTCCAGTTTGCTGCCAGAGAAGATTGGGAACTTCTATGGCTGCGTCTTCAAAAACTTGTACGTCAGCACAGCACGATATTGCTGTGTGCGACTGCATATTGACTGGTGTCAGTGGATTGGCGGGACTATTTCCAACAACGGCAGATGGACAAGCTCCGTCAGTGGACAGCAGTGTGATTATTATTTAATCGAAACTGGTCACGGATTCCATTGCTCCGGTGCATATCTCAGCATCCCGGCGTACAACCCGACCGAACGTAAACCTAACAAGTCCGTTATCGCTACCGCTGCTCGTGGCTCCGTCTACTCCGCGTGCTACATGGAAGACACCCCTTCCTATGTCACCATCCTTAACAAGTGGTGGAACGATGGGAACGAGAAGGGCTTCGGCTTAAACATCGATTGTATTGGTTCGCAGTACCGTCCTGATAGAACCTATAAGTACTTGACTTTCGAGGAAGGTGCTTTTGGTTACTACGACGAAAACGAAAACTGGGTGCCGCCAGCCGGATACGGTTCATACCCATCGACAAACGGTATTGACTTCGTTCGCTTCGGCAGCCCTACACACGATACTGGGGCATTTCCACACGGCGGGTTTGACTTCAAGTATGGTACTTATGGTGTGATGTACAGCACCAATACCACTTACACAGAACCACCAGATGTGGATAGTATGCGCGGTCACAAAACCACCAAGGAGATGTTCTCTCCGTATGGGCTGATGGCAGCGAATGGCATCCTGCAACTGCCGGTTTTGTCTCCTGCAATGCACAGCAATATCTGTATCTGGTACAAAGACCTGACCGGAAGCTTTGACCTGTCCAACATCGCTATCTGGACTAATGCCAACATTGACCAGAATTCCGCAGATGCCGGGTACAACCAGAACCTTTTCTTTGCCCGTGCGGAAATGGCTATTGATTATGGTAATGGCTATAAAATGGCGATTATCCAGAACCTTAAGTGGAACAACAATGATGGTGTTGGTACAGCAGGAAGCCAGCAGTCATTGCAGTTTACTATCCCCGACACCACTCCGATTATTCTCAAGGCTGTCCAGGCGTTCACTGGTGGTATTCCGGTATTCCCTGTCGGGCTGGATTATCGTCCTGAGACGTCAGATTTATGTGTGTGGGGTCACGTCAATCCGAGTAACGGGTTTAAGTACAATCTGTTTAAAAAGGTTGGCGGCGGTATCTTCATGCCAGAGGATGTCATTTACCCTTGGACGGCACACCAGCGGGCGAACACTGATTATAAGTTTGCGACCACTGTTTACGAGGATTATGGCTTTACGAATCTGCCGTTAATCATCAAAGGCGGGAATAGCATCGGTGCCTTCTTCGCTAAAGAGTTCACTGTATCAATTGTTGCAGTCGATTCCACTAATGGCCGGACAACCGTAGACGTACCCGCTGCGTATAAGCCATACGTTTTCATGGGGGTTCCTCTTAAAATTACCGGAGGGTCTTCTACCGGGTATACAGGGGAAGTGCGCATTCATAAGCGTAACCTGAAAACTGATGGAACTCTTAGTGGGCAATATGTTCTCGATGCCGTTGTTGGTACTGTTGGGGATACTCTGAATATCAACCAGCGAACGCTTACAGCGCGTACTTATCGCCGTGACTACACCGCAGACGCCTTGACCGCAAACGGCAGCTTTACCCTGCGTGGGACTACAATGCGCTTCGGGTATAACGCAGGGTCGACAGGCACACGAGCGGTTGAGTTTTATGTCGGTGGGGCAACTACTAAATCTGCTGATATAACCGCATACGGAACCTCAATCGGTCTTAATGCTAGTTCCCTTGTCTTTGGCGGTAACATCGGTTTCAGTGCAACAAACACCTGGGACATAGGTTCATCTGGTAACACTGTTAAAAACATCTACACCCAGAATGCGGTAACTGTCGTTTCAGACCGCGACCATAAGCCTGTACAGGAAGGGATACCCGATAACATCCTTGATATATGGGGAACAATCGGTATCAAGCGATTTAAGTACGACTGGGCTATCGCGGAGAAAGGCGAAGATGCTGCTCGCTGGCACGTAGGCTACATTGCTCAGGATATCATTGAAGCATTCGAAGCTGCTGGCGAAGATGCTACCAAATGGGCGTTGGTTGTACGTAATGAATGGCCTGCTGAGGATGAGGTAGTTGAGGCATGGGATGATGAGTACGAAACCATTCCAGCGCAGTACGACGCGCAAGGTCAGAAGATATCTGAGGAAACTCAGGTGCTGGTACGACAAGCAGGATCCCGCGTTGTAAAAGAAGCTATTCCAGCAGGAGGCGAGTGGCGACTTGTTATGGATGAGTGTAATGCTATGGAGGCTGCGTATCAACGCAGACGTCTGGACAGGATTGAAGCCGCTATCACAGACGGGAAGGGATAA
Genome Context
Genome Context
Tertiary structure
PDB ID
5ca142455fb4f823092aaece9308288b1ef81732a2d9534c31343790b4078e1d
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50