Protein

View in Explore
Genbank accession
XWX32799.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MALDNFKPLTQDNNVKDMSDTINMVGEELTKPRNVFELVSELQIKVNNSQLKSITTDKGLSKIPTGTRILDVKDIGVYFYSASLLATKTDKPELNSQDSILVVTPTNSSSIVVQHMYPLTTSGNAIQHVYRVVIGNTAGDWVYQRGLVGGNNSSLSGVNLNTFNTPGEYFVDNVTGLPEGESEGLLRVYRGNRNQVVQEFISGYNKIKYYKISSSSTGWIKELEPKSLSKYTLGGINDEGQGTFGLLIYTSDNKTFQQAITDHIAKTGQSTFTFYIQGGAPGNPLGSLSGRGIFICESTSESALANNLYGVYHAISTTGTLVTGSVIGGDWRIPKGSDSTTTLWSGVKEFTSKTAEKMAYSSNDFDYFKIYVTIGGTNSNSIYREGFEFGKHSANKYKISSVNVPSSGTTLEYFMCSISFDGDKFKIDEYNTKTNGKCYVTEIVGIKRPV
Physico‐chemical
properties
protein length:450 AA
molecular weight: 49238,57210 Da
isoelectric point:6,55310
aromaticity:0,10222
hydropathy:-0,32622

Domains

Domains [InterPro]
DC_1773
STR
10–241
DC_1773 IPR057110
cd19958
STR
151–219
cd19958
DC_0448
STR
194–448
DC_0448
XWX32799.1
1 450
Architecture
STR
STR 10-448 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XWX32799.1
1 450
Domain Start End Length (AA) Confidence
N-terminal 1 323 323 0,5995
Central domain 324 439 117 0,0118
C-terminal 440 450 10 0,9961
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-323
Central
324-439
C-terminal
440-450

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage PG-2021_33
[NCBI] 		2815624 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Mammaliicoccus vitulinus
[NCBI] 		71237 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XWX32799.1 [NCBI]
Genbank nucleotide accession
MZ417330.1 [NCBI]
CDS location
range 89239 -> 90591
strand +
CDS
ATGGCTTTAGATAACTTTAAACCTCTTACACAGGATAATAATGTAAAAGATATGTCTGATACTATAAACATGGTAGGAGAAGAATTAACTAAACCTAGGAATGTTTTTGAATTAGTATCAGAGTTACAAATAAAGGTTAATAACTCTCAGCTTAAATCAATAACAACAGACAAAGGATTAAGTAAAATACCTACGGGTACAAGAATACTAGATGTTAAGGACATAGGAGTATACTTTTATAGTGCTAGTTTATTGGCAACAAAAACAGATAAACCTGAGTTGAATTCACAAGATTCTATATTAGTAGTTACTCCTACTAATTCTTCTTCTATAGTTGTACAGCATATGTACCCACTAACAACTAGTGGTAATGCTATTCAGCATGTATATAGAGTGGTTATAGGAAATACAGCAGGAGATTGGGTATATCAAAGAGGTTTAGTAGGAGGTAATAATAGCTCCTTAAGTGGAGTAAACTTAAATACATTCAATACACCTGGAGAATACTTTGTGGATAATGTTACAGGTCTTCCAGAAGGAGAATCAGAAGGACTTCTAAGAGTATACAGAGGTAACAGAAATCAGGTTGTACAAGAGTTTATATCAGGGTATAATAAAATTAAATACTATAAAATATCAAGCAGTTCAACAGGGTGGATAAAAGAATTAGAACCTAAATCTTTAAGTAAGTATACCCTAGGGGGAATTAATGATGAAGGACAAGGTACTTTTGGTTTACTAATATATACAAGTGATAATAAAACATTCCAACAAGCTATAACAGACCATATAGCAAAAACAGGACAATCTACATTTACATTCTATATACAAGGTGGAGCCCCAGGAAACCCATTAGGTAGTCTTAGTGGTAGAGGTATATTTATATGTGAATCTACTAGTGAAAGTGCATTAGCCAATAACTTATATGGTGTGTACCATGCAATATCTACAACGGGTACATTAGTAACAGGTTCTGTTATTGGTGGGGATTGGCGTATACCTAAAGGTTCAGATTCTACAACTACTTTGTGGTCTGGTGTTAAAGAGTTCACAAGCAAAACAGCAGAAAAAATGGCTTACTCATCCAATGATTTTGATTATTTTAAAATATACGTTACAATAGGTGGAACTAACAGTAATTCTATCTATAGAGAAGGTTTTGAGTTTGGTAAACACAGTGCTAATAAGTACAAAATATCTAGTGTAAACGTCCCATCAAGTGGAACTACATTAGAATACTTTATGTGTTCAATATCATTTGATGGAGACAAGTTTAAAATAGATGAATATAATACTAAAACAAATGGTAAGTGTTATGTAACAGAAATAGTAGGTATAAAGAGACCTGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
97f1d89ebd8c28b4242f073048bd38f239e8084e19736432708d672cc6bb989c
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7914
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Natural phage communities crosslink different species within the genus Staphylococcus Goller,P.C., Elsener,T., Lorge,D., Radulovic,N., Bernardi,V., Naumann,A., Amri,N., Khatchatourova,E., Hernandes Coutinho,F., Loessner,M.J. and Gomez-Sanz,E. 2024 — GenBank