Protein

View in Explore
Genbank accession
XSB41132.1 [GenBank]
Protein name
side tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,81
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MPGENMLYNTGTIAINGNSATGTGTNWTAPASQVRAGQTIIVMSNPVQLFQISSVNSATSMTVTPAASPALSGQKYGILVSDIISVDGLAQAMSQLIKEYDENIGAWETFASTSANQSITVTINGTSVTIPAIGKLLQKSTNGALAVKDGGTGATTAADARTSLGLVDSNGLIPVELGGTGGKTQATARAGIGAAASGVNADITRFSAVVPYYGLAVDRPNSGYFSSYDVNGSYARIVKPYNLNILDAVTGLNITTSFGHYMQSSGAVEQGGPCITCAGGGGYVRFWYFINGTGVIQTSSGNITPAVSDIRVKNEKKVITEEEAVAFIQDWESILYTLKWSPDKTRIGFRAQDIFKRNPDLIDRLPLSDGEGGMIDDGMVVDVAEVATGYLVPVVQQLLRRVSELEKSLVNSGSLPQPRR
Physico‐chemical
properties
protein length:420 AA
molecular weight: 44041,06700 Da
isoelectric point:5,13190
aromaticity:0,06905
hydropathy:-0,00976

Domains

Domains [InterPro]
DC_0709
STR
1–312
DC_0709
DC_0203
RBD
290–412
DC_0203
IPR030392
CHP
308–409
IPR030392
XSB41132.1
1 420
Architecture
STR
RBD
STR 1-312 | RBD 313-412 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage mEp506
[NCBI] 		3416466 Viruses >
Host Escherichia coli str. K-12 substr. MG1655
[NCBI] 		511145 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XSB41132.1 [NCBI]
Genbank nucleotide accession
PV340542.1 [NCBI]
CDS location
range 38490 -> 39752
strand +
CDS
TTGCCTGGAGAAAATATGCTTTATAACACTGGAACCATCGCCATTAACGGAAACAGCGCCACCGGCACGGGCACGAACTGGACGGCACCCGCCAGCCAGGTTCGCGCTGGCCAGACGATTATCGTGATGTCTAACCCGGTGCAGCTGTTTCAGATTTCATCCGTGAACAGCGCCACGTCAATGACGGTTACTCCAGCTGCTTCCCCGGCGCTGAGCGGCCAGAAGTACGGCATTCTGGTATCAGACATTATCTCGGTTGATGGACTGGCACAGGCGATGTCGCAGCTCATTAAAGAATATGACGAGAACATTGGAGCGTGGGAGACGTTCGCCAGTACTTCAGCAAACCAGAGCATCACCGTAACGATTAATGGGACCAGTGTAACTATTCCTGCAATCGGTAAATTACTCCAGAAAAGTACGAATGGTGCGCTAGCTGTTAAGGATGGTGGGACCGGAGCGACCACTGCTGCAGACGCTCGCACAAGCCTCGGTTTAGTAGATAGCAATGGACTCATACCTGTTGAACTTGGGGGGACTGGGGGCAAAACTCAGGCGACGGCCAGGGCGGGTATTGGTGCAGCAGCGTCGGGTGTAAATGCTGATATTACAAGATTTTCAGCGGTTGTACCTTACTACGGACTGGCTGTTGACAGGCCGAATTCAGGTTATTTCTCAAGTTATGACGTCAATGGTTCTTATGCACGTATCGTTAAACCCTACAATCTGAACATTCTTGATGCGGTTACAGGTTTGAATATCACAACTTCCTTCGGACATTACATGCAGTCTTCTGGGGCGGTAGAGCAGGGAGGTCCGTGCATAACGTGCGCCGGGGGAGGTGGGTATGTTCGATTCTGGTATTTCATCAATGGAACCGGTGTAATTCAGACATCGTCCGGGAATATCACTCCTGCTGTTTCAGATATCCGCGTAAAGAATGAGAAAAAAGTTATCACCGAAGAGGAGGCTGTTGCATTTATTCAGGACTGGGAATCCATTCTATACACATTGAAATGGTCTCCAGATAAGACGCGCATTGGATTTCGTGCGCAGGATATCTTTAAGCGTAACCCCGATCTCATTGACCGCCTTCCATTGTCAGATGGCGAAGGTGGCATGATAGATGATGGAATGGTGGTTGATGTGGCAGAGGTGGCAACAGGTTATCTTGTTCCTGTTGTTCAGCAATTGCTACGGCGGGTAAGTGAACTGGAAAAAAGCTTGGTGAATAGCGGAAGTTTACCGCAGCCACGCAGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0ab085fdcf99dd5ceeed958ad1936994852c2953371d050c2682b7c81c3c4b4d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7451
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
E. coli prophages encode an arsenal of defense systems to protect against temperate phages Brenes,L.R. and Laub,M.T. 2025 — GenBank