Protein

View in Explore
Genbank accession
XDJ02692.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,61
Protein sequence
MAEITKARTLTYDGEEVYARSHIDVVDGLDKSKLLTDEQKRKLENFNADAIDVATTSKNGLMSAQDKTKLDSLKQFDPDTLTNATTQKAGLMSAEDKRRLDELKTNSNAYDKGLSNATASSSVIAANINKWPNATQTVNLSKKVSECQNGIVLVWRSDTEDDNYHYQYVPKYHVSAHSTTKILHLIPTNSANEFCTKTVIVKDNSITGTVDNHNRATNANKVRLHEILEY
Physico‐chemical
properties
protein length:230 AA
molecular weight: 25638,23580 Da
isoelectric point:6,38412
aromaticity:0,05652
hydropathy:-0,67870

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage Pel11
[NCBI] 		3235046 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus hyicus
[NCBI] 		1284 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XDJ02692.1 [NCBI]
Genbank nucleotide accession
PP971698.1 [NCBI]
CDS location
range 33699 -> 34391
strand +
CDS
ATGGCTGAAATTACTAAGGCTAGAACATTAACTTACGATGGTGAAGAGGTTTATGCTAGATCACACATTGATGTTGTTGACGGTTTAGATAAATCAAAGTTATTAACTGACGAGCAAAAACGAAAACTAGAAAACTTTAATGCGGATGCAATTGATGTTGCAACGACATCGAAAAATGGTTTGATGTCCGCGCAAGACAAAACAAAATTGGATAGTTTAAAACAGTTTGACCCTGATACACTCACAAATGCGACTACTCAAAAAGCGGGCTTAATGTCCGCTGAAGATAAGCGTCGCCTTGATGAGTTGAAAACAAATTCAAACGCTTACGATAAAGGGTTATCAAATGCAACTGCATCCAGTTCAGTTATTGCAGCAAACATCAACAAATGGCCAAACGCAACTCAAACTGTAAATTTAAGTAAAAAAGTGAGCGAATGTCAAAATGGCATTGTGTTGGTATGGCGTTCTGACACTGAAGATGATAACTACCATTATCAATATGTACCTAAGTACCACGTTTCAGCACATAGCACAACAAAAATTTTGCATTTAATCCCTACAAACTCAGCAAATGAGTTTTGTACAAAAACGGTTATTGTAAAAGATAACTCGATAACAGGTACAGTTGACAATCATAACAGAGCAACAAACGCTAATAAAGTACGATTGCATGAAATTTTAGAATATTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
b714e2e14698dc75faaa56ea565101760a0f66a70229f418b9baa0cea7c51b48
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7260
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
New lytic and new temperate phages specific for Staphylococcus hyicus Petrzik,K. and Sovova,L. 2025-03-14 — GenBank