Protein
View in Explore- Genbank accession
- UNY40283.1 [GenBank]
- Protein name
- putative noozle protein
- RBP type
-
TSP
- Protein sequence
-
MPTIDIPLGEFLPSQPTAKNPGCVIADNVIPAEGGYAPLPAPIARPETVPGRVHGAELMFRPEGVPFIVGGTSGRLFVRVGNTVTSQVSTPALDVGLSWDFAQFNNFIIATAPGNIPRYIPDYTAGVSFIALPGSPPIARYCERFAEFVMLGNIDGAESRVQWSSYNSPAGSWAPARITQAGFNDLNPRFGAVTALVGGCYPMVFQDRAVWLVQYVGPPSVWQFTLASEDRGCIAPFSAVTVGSQTFFLSQDGFWLTNGSEFVPIGSQRVNRWFFETADNATLNRTQGTVDWRNKCIVWAFRSAQAPGEDFDRVLIYSWEQDRFSTATINVQRLVGSRIPGTTLEDLDALFGSLENVTPNLDAAEWRAGDRILAAFIGQSGQAAYSTFNGPALEANWETGFFQPMPGSRAFVSEAQAVMDAQDWVMQVAPVQMDNQRTETYGPFTGPGVNGASPMRGDGKEMRLAVRMPDGATWERVIGVQLTFRPSGRR
- Physico‐chemical
properties -
protein length: 490 AA molecular weight: 53335,49120 Da isoelectric point: 4,88090 aromaticity: 0,11429 hydropathy: -0,10776
Domains
Domains [InterPro]
No domain annotations available.
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
490
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 382 | 382 | 0,8605 |
| Central domain | 383 | 479 | 98 | 0,1652 |
| C-terminal | 480 | 490 | 10 | 0,9945 |
Note: Constraints were applied during segmentation.
Fixed 48 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Fixed 48 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-382
1-382
Central
383-479
383-479
C-terminal
480-490
480-490
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Paracoccus phage vB_PmaP_KLEP18-1 [NCBI] |
2928861 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host |
Paracoccus marcusii [NCBI] |
59779 | cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Rhodobacterales |
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
UNY40283.1
[NCBI]
Genbank nucleotide accession
OM654376
[NCBI]
CDS location
range 9274 -> 10746
strand +
strand +
CDS
ATGCCCACGATCGACATCCCCCTCGGCGAGTTTCTACCCTCGCAGCCGACTGCTAAAAATCCCGGCTGCGTGATCGCCGACAACGTGATCCCGGCCGAGGGTGGTTACGCGCCCCTGCCTGCCCCGATCGCGCGCCCTGAGACGGTTCCGGGCCGCGTGCATGGTGCTGAGCTGATGTTCCGGCCCGAGGGCGTTCCGTTCATCGTGGGCGGCACGTCCGGGCGGCTGTTCGTGCGCGTCGGAAACACGGTCACGTCGCAGGTATCGACGCCCGCGCTGGACGTGGGGCTGTCGTGGGATTTCGCGCAGTTCAACAATTTCATCATCGCCACCGCGCCGGGAAACATCCCACGGTATATCCCGGATTACACGGCGGGCGTGTCGTTTATCGCGCTGCCCGGATCGCCGCCGATCGCGCGATACTGCGAGCGGTTCGCTGAGTTCGTCATGCTGGGGAACATCGACGGCGCCGAGAGCCGCGTGCAGTGGTCGTCGTATAACTCACCCGCCGGATCGTGGGCGCCCGCACGGATCACGCAGGCCGGTTTCAACGACCTGAACCCGCGTTTCGGAGCGGTGACGGCGCTGGTCGGCGGGTGTTATCCGATGGTGTTCCAGGACCGCGCGGTCTGGCTGGTGCAGTATGTCGGGCCGCCGTCTGTCTGGCAGTTCACGTTGGCGTCGGAGGATCGCGGGTGCATCGCGCCGTTCAGCGCGGTCACGGTCGGATCGCAGACGTTTTTCCTGTCGCAGGACGGTTTCTGGCTGACGAACGGCTCGGAGTTCGTCCCGATCGGCAGCCAGCGCGTCAATCGGTGGTTTTTCGAGACGGCTGACAACGCGACGCTGAACAGGACGCAGGGAACGGTTGACTGGCGAAACAAGTGCATCGTATGGGCGTTCAGGTCGGCACAGGCACCGGGCGAGGATTTCGACCGCGTGCTGATCTATTCGTGGGAGCAGGACCGGTTCAGCACGGCGACGATCAACGTTCAGCGGTTGGTCGGATCGCGCATCCCCGGCACGACGCTGGAGGATCTGGACGCGCTGTTCGGGTCACTGGAAAACGTCACGCCGAACCTGGACGCCGCCGAGTGGCGCGCGGGTGATCGCATCCTGGCCGCGTTCATCGGTCAGTCGGGGCAGGCCGCGTATTCGACGTTCAACGGGCCAGCGTTGGAAGCGAATTGGGAGACTGGATTTTTCCAGCCGATGCCGGGATCTCGCGCGTTCGTCAGCGAGGCGCAGGCGGTCATGGATGCGCAGGATTGGGTTATGCAGGTCGCCCCCGTCCAGATGGACAACCAGCGCACGGAGACTTACGGACCGTTCACCGGGCCGGGCGTCAACGGCGCGTCACCGATGCGTGGCGACGGCAAGGAGATGCGGCTGGCGGTTCGGATGCCGGATGGCGCGACGTGGGAGCGCGTGATTGGCGTGCAGCTGACATTCAGACCGAGCGGGAGACGATAG
Genome Context
Genome Context
Tertiary structure
PDB ID
bb4c760d6d03149f076b0f482d63bd5884ac80e0bc1c5f2b7da35df86d3e8ffe
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50
Literature
| Title | Authors | Date | PMID | Source |
|---|---|---|---|---|
| Complete genome sequence of Paracoccus bacteriophage vB_PmaP_KLEP18-1 | Simoliunas,E., Simoliuniene,M., Kvederaviciute,K. and Sulcius,S. | — | — | GenBank |