Protein

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Genbank accession
WES09880.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTRNVEELFGGVITAPHQIPFTYKSNVGGETFLSLPFYPVTGVVTINGGMQVPLDNFEIEGNTLNLGRALSKGDVVYCLFDKILSPEDTAKGIRIYKFQAVGGETEFTPDFTSYGVQSLYIGGEYKTPEIEYSYNSTTGKVSLQTALTAGVWVVAEMSVKQPNISPLFDRSIQEIARSANVKDSEVIVSTDTISLLDGKKVVYDIATQTSYGLPTIPDGSVISSVSGGKLNYNPGDVQVNLLPLPNSAALLRAELGSPTGTNLVNFKNSAVGALVRSVTSKLEDNPISVKDYGCKGDGVTDDTAGLQLAVAGALSGLVIYFPKGIYLTSLPLNFTKPVTLIGEKGARIELTGGDHDYVIQFDFRDTDLMYWGYEAYMSNIIVDGKGFAKDGFSLRGVISSRFDNLRATNISRAGLHCWWTQCNLYNNFHCSKNVELFTTTPKYGILIDYEEGSPSKRGTSADTFINPVCEHTTEAGIEATFCINTIFMNGTSEGCRFGIAFGHESDLAQTAVTNTVIGMDMEVNSDGDVLLRKTATSNLFLGVMAGYSSPSSQIQGAEFNRWIGGSSSGFHFYGGTKGNKIEGTMLLGASATILDDDKTNDWDSLYNISNATYTGSTNPVNKRVQHDGTGTVTIDPMKCSLATINATSSTITINTLDNARDGMRMDMIIYNTSGQPLTVNWGDSFRIGGFVPPESGKQKGLSFVWDANFAHWYCVGMSADGLVY
Physico‐chemical
properties
protein length:724 AA
molecular weight: 78178,99450 Da
isoelectric point:4,89647
aromaticity:0,09807
hydropathy:-0,11146

Domains

Domains [InterPro]
DC_0063
STR
1–713
DC_0063
G3DSA:3.30.2020.50
ATT
156–244
G3DSA:3.30.2020.50 IPR012334
IPR011050
STR
280–640
IPR011050
IPR024535
ENZ
287–385
IPR024535
WES09880.1
1 724
Architecture
STR
ATT
STR
STR 1-155 | ATT 156-244 | STR 245-713 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WES09880.1
1 724
Domain Start End Length (AA) Confidence
N-terminal 1 303 303 0,9930
Central domain 304 617 315 0,9902
C-terminal 618 724 106 0,9626
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-303
Central
304-617
C-terminal
618-724

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SWJM-01
[NCBI] 		3034861 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WES09880.1 [NCBI]
Genbank nucleotide accession
OQ594352 [NCBI]
CDS location
range 71563 -> 73737
strand -
CDS
ATGACCAGAAATGTAGAAGAATTATTCGGCGGCGTGATCACAGCTCCCCACCAGATTCCTTTCACGTATAAATCAAATGTCGGTGGAGAAACTTTCCTTTCCTTGCCGTTCTATCCTGTCACTGGCGTAGTCACAATCAACGGTGGTATGCAAGTTCCGTTAGACAACTTTGAAATCGAAGGAAATACGTTGAATCTCGGGCGCGCATTGTCCAAAGGCGATGTTGTGTATTGCTTATTCGATAAAATTCTTTCGCCAGAAGATACAGCCAAAGGTATCCGCATATACAAATTTCAGGCCGTAGGAGGTGAAACCGAGTTCACTCCTGATTTCACATCCTATGGTGTCCAATCTCTTTATATCGGTGGTGAGTACAAAACACCCGAAATTGAATATTCCTATAACAGCACGACAGGGAAAGTGTCTTTGCAAACTGCACTGACTGCAGGCGTTTGGGTAGTCGCTGAAATGTCTGTTAAACAACCGAATATCAGTCCGTTGTTTGACCGCAGTATTCAAGAAATTGCCCGTTCTGCTAATGTTAAAGACTCTGAAGTCATCGTTAGTACGGACACCATATCTTTGTTGGATGGGAAGAAAGTTGTTTATGACATAGCGACGCAAACCAGTTATGGTTTACCAACCATTCCTGATGGTTCTGTCATTTCTTCTGTATCTGGTGGGAAATTGAATTACAACCCAGGAGATGTTCAGGTTAATTTGTTGCCATTGCCTAATAGTGCTGCATTACTGAGAGCAGAATTAGGTAGTCCAACGGGTACAAATTTGGTTAATTTTAAGAATTCGGCAGTTGGTGCATTGGTACGTTCTGTTACTTCTAAATTAGAAGATAATCCGATAAGTGTTAAGGATTATGGTTGCAAAGGAGATGGTGTTACCGATGATACCGCTGGATTACAATTAGCAGTTGCAGGGGCTTTATCAGGATTGGTCATATACTTTCCTAAAGGGATTTATCTTACCAGTTTACCATTGAATTTTACCAAACCTGTGACTTTAATAGGAGAGAAGGGCGCTCGTATTGAATTAACTGGTGGTGATCATGATTATGTTATACAATTTGATTTTCGTGATACAGACCTGATGTATTGGGGCTACGAAGCATATATGAGCAATATTATTGTAGATGGAAAGGGATTTGCTAAAGACGGGTTTTCACTTCGAGGAGTAATTTCTTCTAGATTTGATAATTTACGTGCCACAAATATTTCTCGTGCGGGGCTTCATTGTTGGTGGACTCAATGTAATTTGTATAATAATTTTCATTGTAGTAAGAATGTGGAATTGTTTACCACTACACCAAAATATGGAATATTAATCGATTATGAAGAAGGATCTCCGAGTAAAAGAGGTACTTCTGCCGATACGTTTATTAATCCTGTTTGTGAACATACGACAGAAGCAGGTATCGAAGCAACATTCTGTATCAATACTATATTTATGAATGGTACTTCTGAAGGTTGTCGTTTCGGTATCGCTTTTGGACATGAATCTGATTTGGCGCAAACTGCGGTTACAAATACGGTTATTGGAATGGACATGGAAGTTAACTCTGATGGCGATGTGTTGTTGCGTAAAACCGCGACAAGTAACTTATTTTTGGGGGTTATGGCGGGTTATAGTTCTCCATCGTCGCAAATACAAGGCGCTGAATTTAACCGTTGGATTGGTGGTTCTTCTTCTGGATTCCATTTTTATGGAGGTACAAAGGGGAATAAAATAGAAGGAACTATGCTATTAGGCGCGTCGGCCACTATTTTAGATGATGATAAAACAAATGACTGGGATTCTTTGTATAACATAAGCAACGCGACTTATACAGGTTCGACTAACCCTGTTAACAAAAGGGTTCAACATGATGGGACAGGGACAGTAACCATAGATCCCATGAAATGTAGTTTAGCAACTATTAACGCGACATCTTCCACAATAACCATCAATACTTTAGATAATGCCAGAGACGGGATGCGTATGGACATGATTATCTATAATACATCAGGGCAACCACTTACTGTAAATTGGGGAGACAGTTTCCGTATTGGGGGATTTGTTCCTCCAGAATCTGGTAAACAAAAAGGATTGTCCTTTGTGTGGGATGCTAACTTTGCTCATTGGTATTGTGTTGGTATGTCTGCAGATGGTTTAGTTTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2e8229c673ebd103e08cc5ee4c4fb23cf9fe6ffc967c0e0ac4b279e435234d1f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7738
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of two novel Salmonella phages and their application as a cocktail for biocontrol in foods Pan,H., Wu,G., Zhao,Y., Wan,X. and Li,T. 2023 — GenBank