Protein

View in Explore
Genbank accession
QHB42999.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,82
Protein sequence
MATVTVIPSDITKLKNDVSTLKQDVATIPGDITKLKSDVSTLKQDVAGKASTTDVDNKLKLYLKQNDLSSELGSGRYSGSFYPLTGNDAFYLFNLNTTAQSANLWLDPNAGVSQVLRSTSSSRYKRSVESVIDEYADLMLEMRPVWYRSTCESDRKDWGWYGLIAEEVGEVAPEYVHWRPLQEGEDPAIASSNGMVAEGVMYDRLTVPLIHHVKKLKAENDEMRKEIDELKAVVEALVNKPTTLD
Physico‐chemical
properties
protein length:245 AA
molecular weight: 27297,45370 Da
isoelectric point:4,97713
aromaticity:0,07347
hydropathy:-0,41306

Domains

Domains [InterPro]
G3DSA:1.20.5.170
STR
3–49
G3DSA:1.20.5.170 IPR030392
DC_0536
STR
3–245
DC_0536
Coil
Unmapped
213–240
Coil
QHB42999.1
1 245
Architecture
STR
STR 3-245
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoS_XY3
[NCBI] 		2681376 Uroviricota > Caudoviricetes > Drexlerviridae > Warwickvirus > Warwickvirus tunus
Host Escherichia sp.
[NCBI] 		1884818 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QHB42999.1 [NCBI]
Genbank nucleotide accession
MN781674.1 [NCBI]
CDS location
range 33353 -> 34090
strand -
CDS
ATGGCTACAGTCACTGTTATACCTAGTGATATAACGAAGCTGAAAAATGACGTTTCAACACTAAAACAGGATGTTGCTACTATTCCTGGTGATATAACGAAGCTGAAAAGTGATGTTTCGACACTAAAACAGGATGTTGCAGGAAAAGCATCAACTACTGATGTTGACAATAAGTTGAAGTTGTATCTAAAACAAAATGATCTATCGTCCGAGTTGGGTAGCGGAAGGTATAGTGGGAGTTTTTACCCCCTAACTGGTAACGATGCATTTTATTTATTTAATCTTAACACAACCGCTCAATCAGCAAACTTATGGCTTGATCCAAATGCTGGAGTGTCGCAAGTTTTACGCTCAACTTCCTCTTCTCGTTATAAGCGCAGCGTAGAATCGGTTATTGATGAATATGCGGATCTGATGCTTGAAATGCGTCCTGTGTGGTATCGGTCAACTTGTGAAAGCGACCGTAAAGATTGGGGATGGTACGGACTGATTGCAGAGGAAGTTGGAGAGGTTGCGCCGGAGTACGTTCACTGGCGACCTCTGCAAGAAGGAGAAGATCCTGCCATTGCTTCAAGTAATGGCATGGTGGCGGAAGGCGTTATGTATGACCGCCTCACTGTTCCACTGATTCACCACGTTAAGAAACTGAAAGCGGAAAACGATGAGATGAGAAAAGAAATTGACGAGCTAAAAGCGGTTGTAGAGGCACTGGTAAACAAACCAACCACGTTAGACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e41975af87f95b6b8db0ad255e6f43077b209a508d4b7ba14ad92044abbd1dd6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7979
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequence of a Escherichia coli bacteriophage Fu,P. and Zhao,Q. 2015-02-05 — GenBank