Protein

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Genbank accession
AAX44210.1 [GenBank]
Protein name
T7-like tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,72
Protein sequence
MASVTQTIPTLTGGLSQQPDELKIPGQVSVANNVIPDVTHGLLKRPGGKLVASISDNGTAALNSQTNGKWFSYYRDETESYIGQVSRSGDINMWRCSDGQAMTVNYDSGTATALTTYLTHTNDEDIQTLTLNDYTFLTNRTKTVAMSSTVEPVRPPEVFIDLKATAYARQYAVNLFDNTTTTAVSTVTRIDVELIKSSNNYCDSNGAMVARTSRPSNSTRCDDSAGDGRDAYAPNVGTKVFNVTDGASLTDEANSGSYTYTIDVKDSSNNSVNRGVNLYFRIRTVGQSVPFTTGSGSSATTTYQARYTTTFDLLYGGTGWQEGDYFYVWMKDGYYKITVEAISTANVQANLGLIRPNPTPFDTETAVTAESIIGDIRTAIIATGNFTSANVQQIGTGLYVTRPSGTFNVTAPSSDLLRVMSGEVANVDDLPSQCKHGYVVKVANSEADADDYYVKFFGHNNRDGDGVWEECAKPSRNIEFDKGTMPIQLVRQANGTFTVSQATWQNAEVGDELTNPNPSFVGKTINQLVFFRNRLVFLSDENVIMSRPGEFFNFWSKTATTFTPQDVIDLSCSSTYPAIVYDGIQVNAGLLLFTKNQQFMLTTDSDILSPETAKINAVSSYNFNEKTHPVSLGTTVAFIDNANQFTRFFEMSNVVRQGEPDVVDQSKVISRLLDKNISLVSVSRENSVVFFSQKDTDKIYCFRYFTSGEKRLLQAWTTWTITGNIQYHCMLDDALYVVTRNNNKDQIVKYSLKLDDAGHFVTDTQGTTSTDDDSIYRVHLDHSSSVTAASNTYNTTTIKTTIPKPNGYESTKQLVAYDTDAGNDLGRYALVTVSGSNLEIPGNWSNNSFIIGYLYEMDVQLPTLYVTQQVGDKYRSDAKSSLIVHRIKFSFGPLGVYSTTIQRDGKPDFTETKELGLAGVVGASRLPIVPEVIETVPCYERNTNLKVNVKSEHPAPATLYSLAWEGDFTNRFYKRV
Physico‐chemical
properties
protein length:976 AA
molecular weight: 107595,24940 Da
isoelectric point:5,06637
aromaticity:0,10041
hydropathy:-0,34744

Domains

Domains [InterPro]
IPR058003
TTP
1–192
IPR058003 IPR058003
IPR058003
TTP
1–185
IPR058003 DC_1232
AAX44210.1
1 976
Architecture
TTP
STR
TTP
TTP 1-184 | STR 185-370 | TTP 371-974 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AAX44210.1
1 976
Domain Start End Length (AA) Confidence
N-terminal 1 150 150 0,8126
Central domain 151 367 218 0,8681
C-terminal 368 976 608 0,3141
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-150
Central
151-367
C-terminal
368-976

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage P-SSP7
[NCBI] 		2908095 Uroviricota > Caudoviricetes > Autographivirales > Tiamatvirus > Prochlorococcus phage P-SSP7
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AAX44210.1 [NCBI]
Genbank nucleotide accession
AY939843 [NCBI]
CDS location
range 22608 -> 25538
strand +
CDS
ATGGCAAGTGTTACTCAAACAATACCTACACTGACTGGTGGTTTATCTCAACAGCCAGATGAACTGAAGATTCCTGGACAAGTTAGTGTCGCTAATAATGTGATCCCTGACGTAACACATGGTTTATTAAAGCGTCCAGGAGGGAAGTTAGTTGCATCTATTAGTGATAATGGAACCGCAGCTTTAAATTCACAAACTAACGGTAAATGGTTTTCCTATTATCGTGATGAAACAGAAAGTTATATAGGACAAGTTTCTAGATCGGGCGATATAAATATGTGGAGATGTAGTGATGGTCAAGCAATGACTGTTAACTATGACTCAGGTACTGCTACTGCTTTAACTACATATCTCACACATACAAATGACGAAGATATACAAACACTAACTCTTAATGACTATACATTTTTAACTAACAGAACTAAGACAGTAGCTATGTCTTCAACAGTTGAACCTGTTAGACCCCCTGAAGTTTTTATAGATTTAAAAGCTACAGCTTATGCAAGACAGTATGCAGTTAATTTATTTGATAACACGACTACTACAGCTGTCTCAACTGTAACGAGGATAGATGTTGAACTTATTAAATCAAGTAATAATTATTGTGATAGTAATGGAGCTATGGTTGCTCGCACTAGCCGCCCTTCAAACTCGACTAGATGCGATGACAGTGCTGGTGATGGTAGAGATGCTTATGCTCCTAACGTTGGGACTAAAGTATTTAACGTAACAGATGGAGCTAGTCTGACCGATGAAGCAAATTCTGGAAGTTATACATATACTATTGATGTTAAAGATTCCAGTAATAATTCAGTTAATAGAGGAGTAAACCTATACTTCAGAATTAGAACTGTAGGACAATCAGTTCCATTCACAACTGGTTCCGGTAGTAGTGCAACAACTACATACCAAGCTCGTTATACAACAACTTTTGATCTCTTATATGGTGGTACAGGGTGGCAAGAAGGTGATTATTTCTACGTTTGGATGAAAGATGGTTATTACAAAATAACTGTTGAAGCAATTAGTACAGCAAATGTACAGGCAAACTTAGGATTAATTAGACCTAACCCAACACCATTTGATACAGAAACAGCAGTAACAGCTGAATCAATTATTGGTGATATTCGTACAGCTATTATTGCGACTGGTAATTTTACTTCTGCAAATGTTCAACAGATTGGAACTGGTTTATATGTAACTAGACCTTCCGGAACATTTAACGTTACAGCTCCTTCAAGTGATCTGCTAAGAGTTATGTCTGGTGAGGTAGCGAATGTAGATGATTTACCTTCTCAATGTAAGCATGGATATGTTGTAAAAGTTGCTAATAGTGAAGCAGATGCAGACGATTACTACGTTAAATTCTTTGGTCATAACAACAGAGATGGAGACGGAGTATGGGAAGAATGTGCAAAACCAAGCAGAAATATAGAGTTTGATAAAGGCACTATGCCTATCCAATTAGTTAGACAGGCTAATGGAACATTTACTGTTTCACAAGCTACTTGGCAAAATGCTGAAGTGGGGGATGAATTAACTAATCCCAATCCTTCTTTTGTTGGTAAAACAATAAATCAATTAGTTTTCTTTAGAAATAGATTAGTCTTCCTAAGTGATGAAAACGTAATCATGTCAAGACCTGGCGAGTTTTTTAACTTCTGGTCTAAGACTGCTACTACCTTTACACCACAAGATGTTATAGATCTTTCCTGTAGTTCTACATACCCAGCAATTGTGTATGACGGTATTCAGGTTAATGCTGGATTATTGCTATTTACTAAAAATCAGCAGTTTATGCTGACTACAGACAGTGATATTTTAAGTCCTGAAACTGCAAAGATTAATGCAGTATCATCCTATAACTTCAATGAAAAAACACATCCTGTTTCTTTAGGCACTACTGTTGCATTTATAGATAATGCTAATCAATTTACTAGGTTCTTTGAAATGTCTAATGTTGTTAGACAGGGTGAACCTGATGTAGTTGATCAAAGTAAAGTTATCTCAAGATTATTAGATAAAAATATCAGTTTAGTTTCAGTATCCAGAGAAAATTCAGTTGTATTCTTTAGTCAAAAAGATACAGATAAAATCTATTGTTTTAGATATTTTACTTCTGGAGAGAAACGTTTATTACAAGCTTGGACTACATGGACAATAACAGGAAATATTCAATATCACTGTATGTTAGATGATGCTTTATACGTTGTTACTCGTAATAACAATAAAGATCAGATTGTTAAATATTCTCTAAAGCTTGATGATGCTGGACATTTTGTAACTGATACACAAGGCACTACCAGTACAGATGATGACAGTATTTATAGAGTTCATTTAGATCACTCTTCCTCTGTTACAGCTGCATCAAATACTTATAACACTACAACTATTAAAACTACAATTCCAAAACCTAATGGATATGAAAGTACAAAACAGTTAGTAGCTTATGATACTGATGCTGGAAACGATTTAGGTAGATATGCATTAGTTACTGTATCTGGTTCTAATTTAGAAATTCCAGGAAATTGGTCAAACAACTCTTTTATAATTGGTTATCTATATGAGATGGATGTACAACTTCCAACCTTATATGTAACTCAACAAGTAGGAGATAAATATAGATCTGATGCTAAATCCTCACTTATTGTACATAGGATAAAGTTTAGTTTTGGACCTCTTGGAGTTTATTCAACAACTATACAAAGAGATGGGAAACCAGATTTTACTGAAACAAAGGAGTTAGGACTAGCTGGCGTTGTAGGCGCAAGTAGATTACCAATTGTTCCTGAAGTAATAGAAACAGTTCCTTGTTATGAGAGAAATACAAACCTAAAAGTAAACGTTAAATCAGAACATCCAGCACCAGCCACACTTTATTCACTGGCATGGGAAGGAGACTTTACAAATAGATTTTATAAACGTGTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
07a17fe08b0b5a80dcb0a2c69133dd6581abe0e8ee93a5964edf95ebe81f936c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7716
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Transfer of photosynthesis genes to and from Prochlorococcus viruses Lindell,D., Sullivan,M.B., Johnson,Z.I., Tolonen,A.C., Rohwer,F. and Chisholm,S.W. 2004 15256601 GenBank
Three Prochlorococcus cyanophage genomes: signature features and ecological interpretations Sullivan,M.B., Coleman,M.L., Weigele,P., Rohwer,F. and Chisholm,S.W. 2005 15828858 GenBank
Genome-wide expression dynamics of a marine virus and host reveal features of co-evolution Lindell,D., Jaffe,J.D., Coleman,M.L., Futschik,M.E., Axmann,I.M., Rector,T., Kettler,G., Sullivan,M.B., Steen,R., Hess,W.R., Church,G.M. and Chisholm,S.W. 7158 17805294 GenBank
The P-SSP7 Cyanophage Has a Linear Genome with Direct Terminal Repeats Sabehi,G. and Lindell,D. 2012 22606283 GenBank