Protein

View in Explore
Genbank accession
QBX27602.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MTLNCKAYYDELSNQTEIVVRETDPQVSLSFTAIVKGTVEAADLKSKAIEWLVNKYVQTYDNQVTSQKVDEVKQAIDLIKDTAEKAMSEVKQAVDETNKTTAIIKTLIKSVDLSEEAKTEIASQYPSYEVAHDYNAKDIFSYNNNLYEVIQAHRSQSDWLPDGVASLYKPLINATGTIEQVDGTSAEIVVIDEFKQPTGAHDAYKKGDKVTFNGKVYESLADTNVYSPSDYPANWREVVG
Physico‐chemical
properties
protein length:240 AA
molecular weight: 26783,45690 Da
isoelectric point:4,65559
aromaticity:0,08750
hydropathy:-0,47375

Domains

Domains [InterPro]
Coil
Unmapped
69–100
Coil G3DSA:2.10.10.20 G3DSA:2.10.10.20
cd12214
CBM
128–171
cd12214
IPR003610
CBM
128–168
IPR003610
IPR036573
STR
129–170
IPR036573
DC_1737
ATT
166–238
DC_1737
QBX27602.1
1 240
Architecture
ATT
ATT 125-238 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan400
[NCBI] 		2548150 No lineage information
Host Streptococcus parauberis NCFD_2020
[NCBI] 		873447 Bacillota > Bacilli > Lactobacillales > Streptococcaceae > Streptococcus > Streptococcus parauberis

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX27602.1 [NCBI]
Genbank nucleotide accession
MK448929.1 [NCBI]
CDS location
range 34092 -> 34814
strand +
CDS
ATGACTCTGAATTGTAAAGCGTATTACGACGAATTATCGAATCAAACTGAAATAGTTGTTAGAGAGACTGACCCACAAGTTAGCCTCTCTTTTACTGCCATCGTAAAAGGAACAGTAGAAGCTGCCGATTTGAAATCGAAAGCTATTGAGTGGCTTGTCAATAAATACGTGCAAACATACGATAATCAAGTGACATCGCAAAAGGTTGATGAAGTAAAACAAGCAATTGATTTAATCAAAGATACTGCAGAAAAAGCAATGTCAGAGGTTAAGCAAGCAGTTGACGAAACTAACAAAACAACTGCAATTATAAAAACATTGATTAAATCAGTTGACTTGTCAGAAGAAGCAAAAACAGAAATTGCTAGTCAATATCCTTCTTACGAAGTAGCGCACGATTATAATGCAAAAGACATATTTAGCTACAATAATAATCTATACGAAGTTATCCAAGCGCATCGCAGTCAATCAGATTGGTTACCAGATGGCGTAGCGAGCTTGTATAAGCCTTTAATCAATGCCACCGGTACAATTGAACAAGTAGACGGTACAAGTGCTGAAATCGTAGTTATTGACGAATTCAAACAACCAACAGGCGCACATGATGCATACAAAAAAGGGGATAAAGTAACGTTTAATGGCAAAGTATACGAAAGCTTAGCTGATACAAATGTATATTCGCCATCTGACTACCCAGCAAATTGGAGGGAGGTGGTCGGATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
f9528e28626474b1c75b6d5b78af0dbb42a721dd61978594cdda5e9bc68196d4
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8288
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank