Protein

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Genbank accession
XVB82446.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,86
Protein sequence
MNSIKLGNNPMSFVYQGSELLYPNPIKDGLLLWYDFKDVSNASPNKEVARDLSGNNNNGTLQNFAYTNGSGYIDGLKFDNVDDEVSTNVFLDKSFTLSLTLDMDFSADVQFFSAFSASAFYIRRNYNALHCSVYTDKQISSTSGGNLLFYKMQQNNQNKVVVTMSVDDNTKKLKLYGNDELLSTVDTVISIAPVSLIKLGKWNSGSTNLTGKILSAIAYNRALTDREIQHNYKIEKERWGL
Physico‐chemical
properties
protein length:241 AA
molecular weight: 26990,94740 Da
isoelectric point:5,71257
aromaticity:0,11203
hydropathy:-0,35394

Domains

Domains [InterPro]
DC_0797
STR
1–241
DC_0797
IPR013320
STR
13–234
IPR013320
G3DSA:2.60.120.200
STR
24–233
G3DSA:2.60.120.200
XVB82446.1
1 241
Architecture
STR
STR 1-241
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XVB82446.1
1 241
Domain Start End Length (AA) Confidence
N-terminal 1 23 23 0,9810
Central domain 24 222 200 0,0465
C-terminal 223 241 18 0,9952
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-23
Central
24-222
C-terminal
223-241

Taxonomy

  Name Taxonomy ID Lineage
Phage Mammaliicoccus phage phi36
[NCBI] 		3414227 Viruses >
Host Mammaliicoccus sciuri
[NCBI] 		1296 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XVB82446.1 [NCBI]
Genbank nucleotide accession
PV389078 [NCBI]
CDS location
range 29373 -> 30098
strand -
CDS
ATGAATTCTATTAAATTAGGTAATAACCCAATGTCTTTCGTTTATCAAGGGAGTGAGTTACTATATCCTAACCCGATTAAAGACGGGTTACTATTATGGTATGATTTTAAAGATGTGAGTAATGCGAGCCCAAATAAAGAAGTAGCTAGAGACTTAAGTGGTAATAATAACAATGGTACGTTACAAAACTTTGCTTATACAAATGGTAGTGGATATATTGATGGGTTGAAATTTGACAACGTTGACGATGAAGTTTCTACAAATGTATTTTTAGATAAATCTTTCACTTTATCTCTGACATTAGACATGGACTTTTCAGCAGACGTACAGTTCTTTTCAGCTTTTAGTGCTTCTGCTTTTTATATCCGTAGAAATTATAATGCTTTGCATTGCTCAGTATATACCGATAAACAAATAAGTTCAACTTCTGGAGGCAATCTTTTATTCTATAAAATGCAACAGAATAACCAAAATAAGGTAGTAGTGACAATGAGTGTAGATGACAATACGAAGAAATTAAAATTATATGGAAATGATGAATTGCTATCAACTGTAGATACTGTAATATCAATTGCCCCAGTATCATTAATTAAATTGGGCAAATGGAACTCAGGAAGTACAAATTTAACTGGTAAAATACTTTCAGCTATAGCATACAATCGAGCATTAACAGACCGAGAAATACAACACAACTATAAAATAGAAAAAGAAAGATGGGGGTTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0af6c6254fced3139238ce5ad06163da09c0be0c1ef9566bd24dee745f440f11
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9141
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterisation of phylogenetically distinct temperate phages from Kenyan Mammaliicoccus sciuri Cherbuin,J.D.R. 2025-12-01 — GenBank