Protein

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Genbank accession
WGL32445.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MKTLRHYKNFVNYVPERTKENADLLDHGVGFSKDENGNDWYELRKTFREDTWKLVYAKDGSVIQCEQDVQELAVQGSAGVVELEEIPAEYSRYNMMQWWWDGEKLTWYPRYFENQKARLISMASKKIEQYADFMALGEEGLEGLLNAWRIYRLAVYKVDLSVLPFYDWPEKPEDL
Physico‐chemical
properties
protein length:175 AA
molecular weight: 20827,22930 Da
isoelectric point:4,84640
aromaticity:0,14857
hydropathy:-0,67429

Domains

Domains [InterPro]
DC_0382
STR
1–135
DC_0382
IPR003458
RBD
44–173
IPR003458
WGL32445.1
1 175
Architecture
STR
RBD
STR 1-135 | RBD 136-173 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage PGX1
[NCBI] 		3038274 Viruses >
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WGL32445.1 [NCBI]
Genbank nucleotide accession
OQ703770.1 [NCBI]
CDS location
range 33058 -> 33585
strand +
CDS
ATGAAGACTTTACGTCACTATAAGAACTTCGTAAATTATGTCCCAGAGCGCACCAAAGAGAATGCAGACCTTCTAGACCATGGAGTTGGCTTCTCAAAGGACGAGAATGGGAATGACTGGTATGAACTACGTAAGACATTCCGTGAGGACACGTGGAAACTTGTCTACGCTAAAGACGGTTCGGTCATTCAGTGTGAACAGGATGTTCAGGAACTGGCTGTTCAAGGGTCAGCTGGTGTGGTCGAACTTGAGGAAATACCAGCTGAATACTCTCGGTACAACATGATGCAGTGGTGGTGGGACGGTGAGAAGCTCACTTGGTATCCTCGGTACTTTGAGAACCAGAAGGCTCGTCTAATCTCTATGGCCTCCAAGAAGATTGAGCAGTATGCTGACTTTATGGCGCTTGGGGAGGAGGGATTAGAAGGTCTACTAAACGCGTGGCGAATCTATCGCCTTGCTGTGTATAAAGTGGACCTGAGTGTTCTGCCTTTCTATGACTGGCCTGAGAAGCCTGAGGACTTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ec6e850c8234c423a48f9cca086bae23b73d2a9511c9cfc8e2862bd3ae41ed9d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8876
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and identification of phage PGX1 aganist multidrug-resistant Escherichia coli Hu,D., Li,X. and Qian,P. 2023-09-07 — GenBank