Protein

View in Explore
Genbank accession
QPZ53732.1 [GenBank]
Protein name
putative tail tubular A
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MASVVDICNGALNQLGASTILTLTEDSKNARLCNARYTQVRDSLFRSHPWNCLVKRVELARDTEVPSWGFSYQFTLPADCLRVLTILNYDYDYKVEGRKILANHGTVKIQYVARIDDANQYDELLRETISAALAADIAYAVTSSNPTAANMYELFQSKLKEARFVDATEGYNTNPDNGQSDVIGASSFINSRY
Physico‐chemical
properties
protein length:193 AA
molecular weight: 21568,89850 Da
isoelectric point:5,20096
aromaticity:0,09845
hydropathy:-0,27824

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC204P
[NCBI] 		2796524 No lineage information
Host Candidatus Pelagibacter sp. FZCC0015
[NCBI] 		2268451 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPZ53732.1 [NCBI]
Genbank nucleotide accession
MW273926 [NCBI]
CDS location
range 26413 -> 26994
strand -
CDS
ATGGCATCAGTAGTAGACATTTGTAATGGAGCATTAAATCAACTAGGTGCATCAACTATACTTACACTTACAGAAGATTCAAAGAACGCAAGACTTTGCAACGCAAGATACACACAAGTTAGAGATAGTTTATTTAGATCTCATCCTTGGAATTGTTTAGTTAAAAGAGTTGAACTTGCAAGAGATACTGAAGTTCCTTCTTGGGGTTTCTCATATCAATTTACATTACCTGCTGATTGTTTAAGAGTTCTTACAATTTTAAATTATGATTATGATTATAAAGTTGAAGGTAGAAAAATTTTAGCAAATCATGGAACAGTTAAGATTCAATATGTTGCAAGAATAGATGATGCAAATCAATATGATGAATTACTAAGAGAAACTATTTCTGCAGCTTTAGCTGCTGACATTGCTTATGCTGTAACAAGTTCTAATCCAACAGCAGCAAATATGTATGAACTATTTCAAAGTAAATTAAAAGAAGCAAGATTTGTAGATGCTACTGAAGGTTACAATACCAATCCAGATAATGGTCAATCAGATGTGATTGGTGCATCTTCATTTATAAACTCAAGGTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c2139ace305b59e45d83f13ebdcce206b2469aaa146453d1d8dec84329127e12
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9228
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic diversity, life strategies and ecology of marine HTVC010P-type pelagiphages Du,S., Qin,F., Zhang,Z. and Zhao,Y. — — GenBank