Protein

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Genbank accession
AGH57312.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MATQTGKLASAKPAATTWTALYRAPIDSSASGVLNMVSDGTAANVRVGVKKYDIAATLDASTYLLHPGDVITNKTLTFDTSIPIITDQQDTFTPGQLITTNDGETTFKWESYYVPPSTDFYVQKIGILSYSIENQTGSFTVGETVTGGTGSGTAVIYDVIDGSLGGSTLYLGPVTGTTFVEGETLTGGTSSATGDISAGGVGVSRDELVFSDNGSGGTYSLRRSTTLTLFLDRTYKFFVEDSSMSGVGFGLSTTINGTFGIDQTAGTSDDGTEYTTGKTSSGTAGSSGAYVQYDMSANGGGDATYYYFDTLDGTLGGGDQSLQLSVDYSYDTIYIYDLQGTLTNASDAITLGQTTFTLTSNAGSKWGYVQEIDGTSVNIVTGLGSADFAGADTFYDVPKIGTASRSLATISSIVTAANAIDSVDTIMFDNSVDAAERLTSLVIGPGQVLMVYAATQNISFDYSGFQDSSSDFTVRSFDVNASIAADGASGGG
Physico‐chemical
properties
protein length:492 AA
molecular weight: 50924,91840 Da
isoelectric point:4,05003
aromaticity:0,09959
hydropathy:-0,04553

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage S-SSM2
[NCBI] 		536464 Uroviricota > Caudoviricetes > Pantevenvirales > Ahtivirus > Ahtivirus sagseatwo
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGH57312.1 [NCBI]
Genbank nucleotide accession
JF974292.1 [NCBI]
CDS location
range 40963 -> 42441
strand -
CDS
ATGGCAACGCAAACAGGAAAACTAGCATCAGCGAAACCAGCTGCAACTACATGGACTGCCCTGTATAGAGCGCCTATCGACTCTTCTGCGAGTGGCGTTCTAAACATGGTCAGCGACGGTACTGCTGCTAATGTTCGTGTTGGTGTGAAAAAGTATGACATCGCAGCAACGCTGGATGCATCTACTTATCTTCTCCACCCTGGAGATGTGATTACAAATAAAACTCTAACATTCGATACTTCAATTCCTATTATTACTGATCAGCAGGATACATTTACTCCTGGTCAGTTGATAACCACGAATGATGGCGAAACCACATTCAAATGGGAATCCTATTATGTTCCACCCTCAACTGACTTTTATGTACAGAAGATTGGTATTCTTTCATATAGTATTGAAAACCAAACTGGTAGTTTCACTGTTGGTGAGACTGTAACTGGTGGTACTGGAAGTGGTACAGCAGTCATTTATGATGTTATTGATGGATCTCTTGGTGGTTCTACTCTCTATCTCGGTCCTGTAACAGGCACCACTTTTGTTGAGGGTGAAACTCTAACTGGTGGTACATCTTCTGCAACTGGCGATATCTCTGCTGGTGGTGTTGGTGTTTCCCGTGATGAACTTGTGTTCTCGGATAATGGTTCTGGCGGCACCTATAGTCTGCGTAGATCAACAACACTTACATTGTTCTTGGATAGAACTTATAAGTTCTTCGTAGAAGACTCTTCAATGAGTGGTGTAGGTTTTGGATTATCCACAACCATCAACGGTACATTTGGTATTGACCAAACTGCAGGAACATCTGATGATGGAACTGAGTATACAACTGGCAAGACAAGTAGCGGCACTGCTGGTTCTAGTGGAGCATATGTTCAGTATGATATGAGTGCTAATGGTGGTGGCGATGCTACTTACTATTACTTTGACACTCTTGATGGCACCCTAGGTGGTGGTGATCAATCACTGCAATTGTCAGTTGATTATTCCTATGACACCATCTACATATATGACCTTCAGGGTACTTTGACTAATGCAAGTGATGCTATCACTTTGGGTCAAACCACATTTACCTTGACATCTAATGCTGGATCTAAATGGGGTTACGTTCAGGAGATTGATGGAACATCAGTCAACATTGTAACGGGTCTTGGATCAGCAGACTTTGCAGGTGCTGACACATTCTATGATGTGCCTAAAATTGGTACTGCATCTAGATCTCTTGCAACAATTAGTAGCATTGTTACAGCAGCGAATGCTATTGATTCTGTAGATACGATCATGTTTGATAATTCAGTGGATGCTGCAGAAAGATTGACTTCTCTAGTTATTGGTCCTGGTCAAGTCTTGATGGTATATGCCGCAACGCAAAATATCAGTTTTGACTATAGTGGATTCCAAGATAGTTCTTCGGACTTTACTGTACGATCCTTTGATGTCAATGCTAGTATTGCTGCAGATGGTGCATCTGGTGGCGGTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
6d62e79422aca957e860de8253cea3b843e378f35b5a34516a8b500c5084e852
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4342
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage S-SSM2 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank