Protein

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Genbank accession
YP_003358450.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,80
Protein sequence
MTTKVIFTFHSPDGSPQANEKFTVRLTRPGMSDAEHCVVIPETYEMVTDAKGEFTMDLESSTSAYRVTAIGDDDEYEDDPCSQYTFTFYVPDSVDPVYVQELILMPPPNNLPWDEEAMNKITQAVVDARNARDDAEESADRAEAQVGLAAEQVTLAKAEVTKATAQADRSKAEADRATTQATNAANSATAAANSATQANTQANRAKTEADRAKTEADRSKSEADRARDLADAVAEKVEGGSLPPLVGMNETFTYEGTDPYRWTVSGPATAVSDGNVMRLTKTDGSGSRAFLRQAVTFPDSHWIVYMRVKTQTGTAAQNRSAQIRFIAADNKDCVVYFNVNANGLVEPNTIHMQGTEGGTRNAATMFTGLGTEDWLDLAVKYDAVNRHIELFRRMPNGIWQKGGGRLMVDAIKPAFIEVSSMPVAPQNWWLDLDYISVCKPNLICYGDSIAAGQNEYGVTRGNNPYNNNRNWAGTWFGKVPLYATNRNNLVLVQGVQGRRTWQYLSQLSEISNSGVKVVFMHASTNDVKDATMTMAKRTSDTQAIIDQLHAVGAQVVLFNSMQGTKAYNDASSNTVKLRDYTDQWWNTELPKVNGLAQTLDIARLIAKDGYMDPDLAASDGLHLTNASAQKIAYKLGQFFSNSSDTNGFASLDSPAFTGTPTVPTQTPFLPYGRLSPTPSTWLRSSKTGLNGTATVNSPWIAAPVLSCLAEVYVAATTMFPLVQVTPCLLA
Physico‐chemical
properties
protein length:730 AA
molecular weight: 79540,86710 Da
isoelectric point:5,02277
aromaticity:0,08219
hydropathy:-0,37082

Domains

Domains [InterPro]
DC_0617
ATT
1–60
DC_0617 DC_2023 IPR036514
Coil
Unmapped
118–152
Coil Coil IPR051532
Coil
Unmapped
195–229
Coil DC_0711
SSF52266
STR
439–636
SSF52266
cd00229
ENZ
442–638
cd00229
IPR013830
ENZ
444–627
IPR013830
YP_003358450.1
1 730
Architecture
ATT
ATT
STR
ATT 1-60 | ATT 94-405 | STR 406-680 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_003358450.1
1 730
Domain Start End Length (AA) Confidence
N-terminal 1 550 550 0,4366
Central domain 551 719 170 0,3465
C-terminal 720 730 10 0,9899
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-550
Central
551-719
C-terminal
720-730

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage LIT1
[NCBI] 		655098 No lineage information
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_003358450.1 [NCBI]
Genbank nucleotide accession
NC_013692 [NCBI]
CDS location
range 30707 -> 32899
strand -
CDS
ATGACTACCAAGGTGATCTTCACCTTCCATAGCCCGGACGGTAGCCCACAGGCGAACGAGAAGTTCACTGTGCGGCTCACCCGTCCTGGTATGAGCGATGCAGAGCACTGTGTCGTTATTCCCGAAACCTACGAGATGGTGACCGACGCCAAGGGCGAGTTCACCATGGACTTGGAATCGTCTACCTCTGCCTACCGTGTCACTGCTATAGGCGATGACGACGAGTACGAGGACGATCCCTGCTCGCAGTACACCTTCACCTTCTACGTACCGGACTCTGTTGATCCGGTCTACGTACAAGAACTGATCCTGATGCCTCCGCCCAACAACTTGCCATGGGACGAGGAAGCCATGAACAAGATCACCCAGGCGGTGGTCGATGCTCGCAATGCACGAGACGATGCCGAAGAGTCGGCTGACCGTGCAGAGGCTCAGGTTGGTTTGGCTGCTGAGCAAGTGACCCTTGCAAAGGCAGAGGTGACCAAGGCTACCGCCCAGGCTGACCGCTCCAAGGCGGAAGCTGACCGAGCCACTACCCAGGCCACGAACGCAGCCAATTCGGCTACTGCTGCGGCCAACTCTGCCACCCAAGCCAACACGCAAGCCAACCGTGCGAAGACGGAAGCCGACCGTGCGAAGACGGAAGCCGACCGCTCCAAGAGCGAGGCTGATCGGGCACGGGATCTGGCTGATGCCGTGGCTGAAAAGGTCGAGGGCGGTTCGCTGCCTCCGCTGGTGGGCATGAACGAGACCTTCACCTATGAAGGTACCGACCCCTACCGCTGGACTGTCTCTGGCCCTGCTACGGCTGTCTCGGACGGCAACGTCATGCGTCTGACCAAGACCGACGGTAGCGGCTCCCGTGCTTTCCTGCGTCAGGCAGTGACCTTCCCGGACAGCCACTGGATCGTCTACATGCGTGTGAAGACCCAGACCGGTACCGCCGCACAGAACCGGTCTGCCCAGATCCGGTTCATCGCTGCCGACAACAAGGACTGCGTGGTCTACTTCAACGTCAATGCGAATGGCTTGGTGGAACCTAACACCATCCACATGCAAGGCACCGAGGGTGGTACCCGCAACGCTGCAACCATGTTCACTGGTTTGGGAACCGAGGACTGGCTAGACCTTGCTGTGAAGTACGATGCGGTGAACCGCCACATCGAACTCTTCCGTCGCATGCCCAATGGCATCTGGCAGAAGGGCGGTGGACGTCTGATGGTTGACGCTATCAAGCCGGCCTTCATCGAAGTCTCGTCCATGCCTGTAGCACCGCAGAACTGGTGGCTGGATCTGGACTACATCTCGGTGTGCAAGCCCAACCTCATCTGCTACGGCGATAGCATCGCTGCTGGTCAGAACGAGTATGGGGTAACCCGTGGTAACAACCCCTACAACAACAATCGCAACTGGGCTGGTACCTGGTTCGGCAAGGTTCCGCTCTACGCCACCAACCGGAACAACCTGGTGCTTGTCCAGGGTGTGCAAGGCCGCCGTACCTGGCAGTACCTCAGCCAGCTGTCGGAGATCTCCAATTCCGGCGTGAAGGTAGTCTTCATGCATGCCAGCACGAATGACGTGAAAGACGCCACCATGACCATGGCCAAGCGTACGTCGGATACCCAAGCCATCATCGACCAGCTTCATGCTGTCGGTGCTCAGGTAGTGCTGTTCAACTCCATGCAGGGTACCAAGGCATACAATGATGCCTCGTCCAACACGGTCAAGCTACGGGACTACACCGACCAGTGGTGGAACACCGAACTGCCCAAGGTCAATGGTTTGGCCCAGACCCTGGACATAGCACGTCTCATCGCCAAGGACGGGTACATGGACCCTGATCTTGCTGCGAGTGATGGGTTGCATCTGACCAATGCTTCGGCACAGAAGATCGCTTACAAGCTCGGCCAGTTCTTCTCCAACTCCAGCGATACCAATGGTTTCGCTTCGTTGGATAGCCCGGCCTTTACTGGTACTCCGACTGTACCCACGCAGACTCCTTTCCTGCCCTACGGAAGGCTATCGCCAACACCGAGTACGTGGTTACGTTCATCCAAGACTGGACTCAACGGTACGGCTACGGTGAACTCACCATGGATAGCCGCACCGGTGCTCAGCTGTCTGGCGGAGGTGTACGTAGCGGCTACTACCATGTTCCCGCTGGTGCAGGTAACCCCTTGCCTTCTGGCTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
181c022dfd8472f18a662c575ce31b9d60d54aed1c264573cc748c6815f59c6b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7108
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50