Protein

View in Explore
Genbank accession
QVW55305.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MPREDAAQFNGKLSTATYPNKYSTVIPVEAPFYRIGLTLTVTDPVTKVKRKLIEGLDYFLAFYFKELAEAEDDQIYGGIMLLNATDIEYELLAVGRQYRIPASEIGKYLVKTDNKDPRNVDWSELMKYPPIIAPIDPPKDLEEAILRDEIVKALDDIRQGIVARAGELDEAFTEVTNLIFENGKRVFDEEMYQHHLIKNAHNYTCADIGALPVLGKAVDATKAFGRTLAELVNLMSSSGIQQQHIDTLLDNTLGDLLGRMRVLNNDAITFQTSVGHVITMKGEKFIITSPKPLTLKADQDNNEPGLATEFGAGLNTLYVHSGKKGDKWGDYGMEVLAPVFNGVFLVTPDMVGLYLTSVKLLPANAYFKSSDTLKIYGSGKETNKVYMNAELPGATTAVEGLLAITNLSASVASSTAISQKAVTDLKNLLDNYVDDSYTINGKRFVADGNGNMVLTLTKTDFGIDKMDNTAPLAKPVTKALSTVLAGKALSDHTHTIGDLDNVPYGSTSVTGLVKLWDVLDTTNDKLATARLGFVLDQKIDVLSDKINTLLPAWTVGGASYGNDSFLPIPALGNYEGYTKNQTYQKGMVRYQNGKLYSLRNGSNGVPPGDWGIYYAYMDVASDATLSNVQQTSVRYHPAGMSKFPGVKLQAILITGRDAIVCLGDDGKRYLVLFNGTIDHAKHTQVCEVTVPDYQNGNGTAVTTNPFAPTPEMDDLVISGSNVYLLRNTFNNSSYYVAAWSLRIADVASNTAVAFNRVTLNGEGGMSGDNLIIRNGQKTDATQTGQFFSAINAAGIVKWNNARNFVHGPEASHMVFAKEGVIRVNHVATVWFASSTGATINFQLWQTSYLLDTTTNKVTLECPTRFPITADDVSVKYADGSAIGEASAKWGGGSANRRTYGAVMEDFVISQTNNGDPDLMPEIYIASAKGADPFDFLRYDYKVNNTYAGITLNQGRGSVYESGLNFPLSLGGNSPLLWLSSPRGRLAIEVEVDPNGTYGVPGYGGFGPTNNRRVVDSGVYEQLSQMAMIITPTQSGGVLNGWQSTGPETFPYKNVANTFSIATDRYTLSTTDWNKMKQMIIDNAPTGAANGYASEYILAANNAGKALFSLWFLGIGTPQQLCIAQVACTKVVNNANILDIYYFVMQPTFTATNVTFPSVSLLLLDFFNNLDYGLDHASLGEITGGKTKRVGQPLLVTNDGINFGLSLPYTLTIRQIGDLGALNYMASLKLSSGTWSKVAGKSAVRRMAPAHHPESPVYIGQTKQVVKVFVKADAVFCSGEAYSTASFVTDPAMPAAGTPVILAGVQTAEGWILYLTEQVGLDFGSSKYTVPTWEADLEAMFPDNHANQTFYLHARVDNDTPSYVLDTTQHPDSANELFVGVVKTDSNRIVEINVDRVKRLGNVKQVLEHAAVAYRHDMDVARDSKLGTLAPLRKEAIGALNGSGDGYLDSQQTYGVVMAQKRPKKNVSYRFSDLAKMKFSDFSNVAERFWIQSPKVTTVLPAEHAAAAARNMSWIGANAGGVDSAGGYQAMTRVRFTVPGTDDGSTKMVYLAIGVPKSTIEFMYSLTTDDDSTLTTFSPSDDSLFQMSTALPSGKPAVLTILTTFEDAVYSAMLNKFITFELRADDQNGALLRSSDANCPFQIFNVMETTLGSGFVTRAIERSFGNSTLLLNKTVTTGQDAFQPPTQGLKSGSTFTLTVATEYGSEHGIVELDDLQVNLMFRT
Physico‐chemical
properties
protein length:1722 AA
molecular weight: 187059,14060 Da
isoelectric point:5,32135
aromaticity:0,09350
hydropathy:-0,14257

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QVW55305.1
1 1722
Domain Start End Length (AA) Confidence
N-terminal 1 635 635 0,8664
Central domain 636 834 200 0,7120
C-terminal 835 1722 887 0,3067
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-635
Central
636-834
C-terminal
835-1722

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage pEa_SNUABM_29
[NCBI] 		2835893 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QVW55305.1 [NCBI]
Genbank nucleotide accession
MW812339 [NCBI]
CDS location
range 227297 -> 232465
strand +
CDS
ATGCCGAGAGAAGACGCGGCGCAGTTTAACGGGAAACTAAGTACCGCCACCTACCCAAACAAATACTCAACGGTGATTCCCGTTGAGGCACCCTTTTACCGTATCGGTTTAACCTTAACCGTTACTGACCCTGTAACCAAAGTTAAACGTAAGCTGATTGAGGGCCTGGATTATTTCCTCGCTTTCTACTTTAAGGAATTAGCCGAAGCCGAAGATGACCAAATCTACGGCGGGATTATGTTGCTGAATGCCACTGATATCGAGTACGAGCTGCTCGCGGTAGGTCGTCAGTATCGCATCCCGGCTTCCGAAATCGGCAAGTATTTGGTGAAGACCGACAACAAAGACCCGCGGAACGTTGACTGGTCAGAGTTGATGAAGTACCCGCCTATCATTGCGCCTATCGATCCGCCGAAAGATTTAGAAGAAGCGATTCTGCGTGATGAAATCGTTAAAGCATTGGATGATATCCGTCAGGGTATTGTTGCGCGCGCGGGTGAACTCGATGAAGCCTTTACCGAAGTTACCAATCTTATTTTTGAGAACGGTAAGCGAGTCTTCGATGAAGAGATGTATCAGCACCACCTCATCAAAAACGCCCACAACTACACCTGTGCCGATATCGGTGCATTGCCGGTACTGGGCAAAGCGGTAGATGCAACGAAGGCATTCGGCCGTACACTGGCTGAGCTGGTGAACCTGATGTCATCCAGCGGCATTCAACAGCAGCATATCGACACATTGTTGGATAATACGCTGGGCGACCTACTGGGCCGGATGCGTGTTCTGAATAATGATGCTATCACTTTCCAGACATCAGTTGGCCACGTCATCACGATGAAAGGTGAGAAGTTCATCATTACTTCTCCAAAACCACTGACCCTGAAAGCCGACCAGGATAATAATGAACCTGGCCTGGCCACGGAATTCGGTGCAGGCTTAAACACCCTGTATGTCCACTCCGGTAAGAAAGGGGACAAGTGGGGCGATTATGGGATGGAAGTTTTAGCGCCAGTGTTCAATGGCGTGTTCCTGGTAACGCCGGATATGGTCGGGTTGTATTTGACTTCGGTGAAACTGCTTCCAGCCAACGCCTATTTCAAGTCCAGCGACACTCTGAAGATTTACGGTTCAGGGAAAGAGACCAACAAAGTCTACATGAACGCGGAGTTGCCTGGTGCGACCACCGCAGTAGAAGGTCTGCTGGCCATTACCAACCTGTCCGCATCGGTAGCATCGTCCACTGCCATTTCGCAGAAAGCAGTTACCGATTTAAAGAACCTGCTCGACAACTACGTCGACGATTCCTACACCATCAACGGAAAACGTTTCGTTGCTGACGGTAATGGGAATATGGTTCTGACTTTAACGAAGACCGATTTTGGCATCGATAAGATGGACAATACGGCTCCGTTAGCCAAGCCGGTGACAAAGGCCCTGAGTACAGTATTAGCCGGAAAGGCCCTGAGTGACCACACGCACACCATCGGCGACCTTGATAACGTACCGTATGGCTCAACCTCTGTTACGGGCCTGGTGAAGCTCTGGGACGTCCTGGACACCACGAATGATAAACTGGCCACAGCACGCTTAGGTTTTGTGCTAGACCAGAAAATCGACGTGCTAAGCGACAAGATTAATACGCTGTTGCCCGCATGGACAGTTGGTGGTGCTTCTTACGGTAATGATAGCTTCCTGCCGATTCCCGCACTGGGTAATTACGAAGGCTACACTAAGAACCAGACTTACCAGAAAGGGATGGTGCGTTACCAAAATGGTAAACTCTATTCTCTGCGTAACGGTTCGAACGGCGTGCCTCCAGGCGACTGGGGTATCTACTACGCGTATATGGACGTGGCGTCTGATGCTACGCTCAGCAATGTACAGCAGACGTCGGTACGCTATCACCCAGCGGGAATGAGTAAGTTCCCTGGCGTAAAATTGCAGGCCATCCTTATCACCGGTCGTGATGCGATCGTGTGTTTAGGCGACGACGGTAAACGTTATCTGGTGTTGTTCAACGGCACTATTGACCACGCAAAACACACGCAGGTCTGTGAGGTCACGGTTCCCGATTATCAGAACGGTAACGGCACCGCGGTCACCACCAATCCATTCGCACCAACGCCAGAAATGGACGATTTGGTCATCAGCGGTTCTAACGTGTATCTGCTGCGTAACACGTTCAATAACTCGTCCTACTATGTTGCGGCGTGGTCTCTGCGTATTGCGGATGTGGCGAGTAATACCGCGGTGGCTTTTAACCGGGTGACGTTGAATGGTGAAGGTGGGATGTCGGGTGATAACCTGATTATCCGTAATGGTCAAAAAACAGATGCGACTCAGACAGGTCAGTTCTTCTCGGCTATCAATGCGGCAGGGATTGTGAAGTGGAATAACGCGCGAAACTTTGTACATGGGCCAGAAGCCTCACACATGGTGTTTGCGAAGGAAGGGGTGATTCGTGTTAACCACGTTGCGACGGTTTGGTTTGCTTCCTCAACGGGTGCAACCATTAACTTCCAACTGTGGCAAACCAGTTACCTGTTAGATACCACCACGAACAAAGTCACCCTGGAATGTCCTACCCGTTTCCCAATCACGGCTGACGACGTCAGCGTTAAATACGCCGACGGTTCGGCCATCGGGGAAGCGAGTGCGAAGTGGGGTGGTGGCTCGGCGAACCGGAGAACGTACGGTGCGGTGATGGAAGACTTCGTCATCTCGCAGACGAATAACGGTGATCCTGATCTGATGCCGGAAATCTACATCGCTTCGGCGAAAGGTGCAGACCCGTTCGACTTCTTGCGCTATGATTACAAAGTGAATAACACCTACGCAGGCATCACACTTAACCAAGGACGTGGTTCGGTCTACGAAAGTGGACTTAACTTCCCGTTGTCGTTGGGTGGGAACTCCCCGCTGTTGTGGTTGTCTAGCCCACGTGGGCGTTTAGCGATTGAAGTCGAAGTTGACCCGAACGGCACGTATGGCGTACCGGGCTATGGTGGTTTCGGTCCGACCAACAACCGACGCGTTGTCGATTCCGGTGTTTACGAACAACTGAGTCAGATGGCAATGATTATCACGCCTACCCAAAGCGGCGGGGTATTGAACGGTTGGCAGTCGACAGGCCCTGAAACTTTCCCGTACAAGAACGTTGCTAATACCTTCTCCATTGCGACTGACCGCTACACGCTGTCTACGACCGACTGGAACAAGATGAAGCAGATGATTATCGATAACGCGCCAACTGGTGCGGCTAACGGCTACGCGTCTGAATATATCTTGGCGGCTAACAACGCAGGTAAAGCGCTGTTCTCGCTGTGGTTCCTTGGTATCGGTACTCCGCAGCAGCTCTGTATCGCACAGGTTGCCTGTACTAAAGTAGTGAACAACGCAAACATTCTCGATATTTATTACTTCGTGATGCAGCCAACGTTCACCGCCACCAACGTGACGTTCCCAAGCGTGAGTCTGTTACTGCTGGATTTCTTCAATAACCTGGACTATGGTCTCGACCATGCCTCGCTTGGGGAAATCACCGGCGGGAAAACGAAACGCGTAGGCCAACCGTTGCTCGTGACCAATGACGGTATCAACTTTGGCCTGTCCTTGCCGTACACGTTGACCATTCGTCAGATCGGTGACTTGGGTGCCTTGAACTACATGGCGTCCTTGAAGTTGTCTTCTGGTACATGGTCGAAAGTGGCGGGTAAATCCGCAGTACGTAGAATGGCACCAGCCCACCACCCAGAAAGTCCGGTCTATATCGGTCAGACAAAACAGGTGGTTAAAGTCTTTGTGAAGGCTGATGCTGTATTCTGCTCGGGGGAAGCCTATTCGACAGCGTCGTTCGTTACAGATCCAGCAATGCCCGCAGCCGGTACTCCCGTTATCTTGGCTGGGGTTCAAACGGCAGAGGGTTGGATTCTGTATCTGACCGAACAGGTAGGTCTGGACTTCGGTTCTTCTAAGTACACGGTCCCTACGTGGGAAGCCGATTTAGAAGCCATGTTCCCAGACAATCACGCCAACCAAACTTTCTATCTCCACGCACGTGTAGACAACGACACACCGTCTTACGTCCTGGATACCACGCAGCATCCTGACTCGGCGAACGAATTGTTCGTGGGGGTTGTGAAGACTGACAGTAATCGCATCGTTGAGATTAACGTCGATCGTGTTAAGCGCCTGGGTAATGTGAAACAGGTACTGGAGCACGCCGCGGTTGCGTATCGTCACGATATGGATGTGGCGCGAGATAGCAAGCTTGGTACGCTGGCACCTCTCCGCAAAGAGGCAATCGGCGCACTTAACGGTTCTGGTGATGGTTATCTGGACAGTCAGCAAACCTATGGCGTGGTAATGGCGCAAAAGCGTCCGAAGAAAAATGTGTCCTACCGCTTTTCCGATTTGGCGAAGATGAAGTTCTCAGATTTCTCGAACGTGGCGGAACGCTTCTGGATACAGTCCCCGAAAGTAACGACGGTGTTGCCTGCAGAACACGCGGCGGCGGCTGCTCGAAACATGTCGTGGATTGGCGCGAATGCGGGGGGTGTGGACTCGGCTGGAGGCTATCAGGCGATGACCCGTGTACGCTTCACGGTACCGGGTACGGATGACGGGTCGACGAAGATGGTTTATCTGGCGATTGGCGTACCGAAATCGACCATTGAGTTCATGTACAGCCTGACCACCGATGACGATTCGACGCTCACGACCTTCAGCCCGAGCGATGATTCGTTGTTCCAGATGAGCACCGCGTTACCGTCAGGTAAACCCGCAGTGCTGACTATCCTCACTACGTTCGAAGACGCCGTGTATTCAGCGATGTTGAATAAATTCATCACCTTCGAATTGCGTGCGGATGACCAAAACGGTGCGTTGTTGCGTAGCAGTGATGCCAACTGTCCGTTCCAGATATTCAATGTCATGGAAACGACCCTGGGCTCCGGCTTCGTGACCAGAGCGATCGAACGTTCTTTCGGGAACTCTACGTTGCTGCTGAACAAAACGGTGACCACGGGGCAGGATGCGTTCCAACCGCCTACACAGGGCCTGAAATCAGGAAGCACCTTTACCCTCACAGTCGCAACGGAATATGGCAGTGAACACGGTATCGTGGAGCTGGATGACCTGCAGGTCAATCTTATGTTCCGTACCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
37f37988942d9db0db3d6c0a71e97a5a8aabb1a3f8500a95efda971b6bb0d407
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7226
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Erwinia phage pEa_SNUABM_29 Kim,S.G., Lee,S.B. and Park,S.C. 2021-01-07 — GenBank