Protein

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Genbank accession
XQM40339.1 [GenBank]
Protein name
distal tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MYQFRDVEQSRKDSNLSSESFTYNGVYFENVIEGYKTLKVTGRESFQKEINSEVIGQTDGEFYNYSRIAKRDIAITFQLKAKTPNDLMNKFTQLNKLLKKDNARLIFTDESDKYFNATFVQMENVTEGTLMLTGTMLFTCLDPYKYDVNAKTQTLTTGKNYIEVNNEGTAPTFLDVRAEMLSDNGFIGVVTDDRYFQQGNPYENDTVGLTRSETLLNANHWQGGTTTISGVAPRVNSNAYLGKAYQNFYALNQQPSIVDIPSMDYPTRPGEQGIQHLNAMKVLTVQNNFTDNVTGGQNYQGTGLSWEIPNDTQGVKGAVNFRFLFALWFETAYITEASYMQISCIDEHNNTMVSVEFVKDTINNNNANMIVKRYSTDSSFSSNLFTEVIRVPFQPTYWNDLTNCKLRGFSISKHGSDVTVTYPTNAISFALPDFKNVACKHISVFIGRKAPLNNANMLTRRYITDMIFIKDNVNYTEDVPNFFYNGSVWELDSSKNETRINGTPNNVMRDIGSQPIVIPTGTSKVYFGVSNFAKMPNITVSYRQKYL
Physico‐chemical
properties
protein length:547 AA
molecular weight: 62055,84200 Da
isoelectric point:5,73877
aromaticity:0,12066
hydropathy:-0,44918

Domains

Domains [InterPro]
G3DSA:2.40.30.200
ATT
1–146
G3DSA:2.40.30.200
DC_0420
STR
2–547
DC_0420
IPR006520
Unmapped
21–146
IPR006520
IPR008841
STR
39–119
IPR008841
XQM40339.1
1 547
Architecture
ATT
STR
ATT 1-146 | STR 147-547
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XQM40339.1
1 547
Domain Start End Length (AA) Confidence
N-terminal 1 238 238 0,9944
Central domain 239 437 200 0,1325
C-terminal 438 547 109 0,4755
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-238
Central
239-437
C-terminal
438-547

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterococcus phage vB_CECAV_04
[NCBI] 		3403036 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Enterococcus cecorum
[NCBI] 		44008 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XQM40339.1 [NCBI]
Genbank nucleotide accession
PV173148 [NCBI]
CDS location
range 13261 -> 14904
strand +
CDS
TTGTATCAATTTAGGGATGTCGAGCAATCTAGAAAAGATAGCAACCTTTCAAGTGAAAGTTTTACTTATAACGGAGTATACTTTGAAAACGTTATCGAAGGTTATAAAACCTTGAAAGTAACGGGGCGAGAAAGCTTTCAAAAAGAAATTAACAGCGAAGTAATCGGACAAACAGACGGAGAATTTTATAACTATTCTAGGATTGCCAAAAGGGATATTGCTATCACTTTTCAATTGAAAGCGAAAACACCTAATGACTTGATGAATAAATTTACTCAACTAAACAAGTTATTAAAAAAGGATAATGCAAGGCTGATTTTTACTGATGAAAGCGACAAATATTTTAACGCTACATTTGTTCAAATGGAAAATGTAACCGAAGGAACATTAATGTTGACAGGAACAATGTTGTTTACTTGTCTCGACCCTTACAAATATGATGTAAACGCAAAAACTCAAACATTGACAACGGGGAAAAACTATATCGAAGTCAATAACGAAGGAACAGCGCCTACCTTCCTAGATGTTAGGGCCGAAATGTTATCCGATAATGGTTTTATTGGGGTTGTAACTGACGATAGGTATTTTCAACAGGGCAACCCTTATGAAAATGACACGGTCGGTCTAACACGCTCGGAAACCTTATTAAACGCTAACCATTGGCAAGGTGGAACAACCACTATATCGGGGGTAGCGCCACGGGTAAATAGCAATGCTTATTTAGGGAAGGCTTATCAGAATTTTTACGCTTTAAACCAACAACCATCAATAGTCGATATTCCCAGCATGGACTATCCAACAAGACCGGGTGAGCAAGGTATACAACATTTGAACGCAATGAAAGTATTAACCGTTCAAAATAACTTTACCGACAATGTCACGGGTGGTCAAAATTATCAGGGAACTGGTTTGAGTTGGGAAATTCCTAACGATACTCAAGGTGTAAAAGGTGCAGTAAACTTTAGATTTTTATTCGCTTTATGGTTTGAAACGGCCTACATTACCGAAGCAAGCTATATGCAGATATCTTGTATTGACGAACACAACAATACAATGGTCAGCGTTGAGTTTGTAAAAGATACTATCAATAACAATAACGCCAATATGATTGTTAAACGTTACTCAACTGACTCAAGTTTTTCGAGCAACCTTTTCACCGAAGTAATAAGAGTACCTTTTCAACCAACTTATTGGAACGATTTGACTAACTGTAAATTGCGTGGCTTCTCAATTAGTAAACATGGTTCAGATGTGACGGTTACTTATCCTACTAATGCTATATCTTTCGCACTACCTGACTTTAAAAACGTAGCTTGTAAACATATCTCAGTATTTATCGGGCGAAAAGCACCACTGAATAACGCAAATATGTTAACACGCCGATACATTACTGATATGATTTTCATAAAAGATAACGTAAATTATACCGAGGATGTTCCTAACTTTTTCTATAATGGTTCAGTTTGGGAACTAGATAGCAGTAAGAACGAAACCCGAATAAACGGTACACCGAATAATGTCATGCGAGACATAGGTTCGCAACCTATTGTTATACCAACGGGAACAAGTAAGGTATATTTTGGGGTTTCAAACTTTGCAAAAATGCCGAATATAACTGTTTCATATCGACAAAAATATTTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
752f777e903c95308ef2492f738d6395376ce21a118f6787ef70c26d5c8a2a17
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8295
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50