Protein

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Genbank accession
XPP57378.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MGFGPAYGTGRGGGAVDIFTKKDGNPAIFANTGARDTYFTTNPDELAKVKSSGNAVAIGTTDQITAAYVYKNNAWQAIATNFKGDKGAPGAPGDGIDYSHLEDNQLPKWDSKAKMFVSSGILSQEDGEIRMAPNSLTFGHHKMSSAIADVTFTNLGTNENYSFVYQTMNPGDKDAYIREIDSNIEEIVRVPVGTDDVVNPSNTVTVDVDEIFLGGTFILSQDTQDVLMEVYNFDNPTQLIWRDNLGDMPSGENTVTFDTPFKCRAGFKYIIHLLSKAGDLVAKGSGSSFSWKINRAKMYIKKVASQDWVNEQPFIDDVTLTGNMFTFTMANGATKSVTLPPATGGVASPYDFTSFNSDKTPVLSEVANSTPVYHFNGLADSTFTLPSTDILPPNKNIALLIRNASPNNSSLSVVSSGTDFIDRANIRTLNIPQGMLAMFISDYTRDLWHMVPLDSAGSGQNLNTNQIVKSVQPTASGTGLVTTYYDDSSITTTFDPWVSDINKLNDAVDTLQRQLKSKTRYYVYKGSNTPPPDIPTGARGGYYFTFTGTSADVVLPAPSRTAAIADGTILFVDNNSTSYKVTVTTTGSDTIAGATKVDLSAESAAWYVRNGNNWQELYSGYLPESHKKLIDEIKTLISASNTFMRDVGVQGDDPNAGKVECTELEFHKCKVTQDTTVPTKGIVEFEGTTFVNPDGSKITTDVIKLVGMELVDPLDGTPPKLLLHGGGNLPTPHPTSAYGFFSPDADTPDSIDPNSLPVFRNGRVTLHKDTTDAQYAYVILPPGEGTDAERIGELGGLPSYWAKSDKIYNIGGVSRTYTVFRSPYPFREQDLTLVIYH
Physico‐chemical
properties
protein length:837 AA
molecular weight: 90761,08940 Da
isoelectric point:4,85618
aromaticity:0,09677
hydropathy:-0,32055

Domains

Domains [InterPro]
DC_1058
STR
25–825
DC_1058
Coil
Unmapped
501–521
Coil
XPP57378.1
1 837
Architecture
STR
STR 25-825 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XPP57378.1
1 837
Domain Start End Length (AA) Confidence
N-terminal 1 736 736 0,9031
Central domain 737 826 91 0,3496
C-terminal 827 837 10 0,9451
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-736
Central
737-826
C-terminal
827-837

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage Pylo
[NCBI] 		3388594 Viruses >
Host Vibrio campbellii
[NCBI] 		680 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPP57378.1 [NCBI]
Genbank nucleotide accession
PQ768830.1 [NCBI]
CDS location
range 86698 -> 89211
strand +
CDS
ATGGGATTTGGCCCAGCCTATGGTACTGGTAGGGGCGGTGGAGCAGTAGACATCTTTACTAAAAAGGATGGGAACCCTGCCATTTTCGCCAATACTGGTGCTAGAGACACATACTTTACAACAAACCCTGATGAATTAGCTAAAGTAAAATCATCAGGTAATGCAGTAGCAATAGGTACTACTGATCAAATAACAGCTGCCTATGTATATAAAAATAATGCATGGCAAGCAATTGCAACCAACTTCAAGGGCGACAAAGGTGCTCCAGGTGCTCCTGGGGATGGTATTGATTACAGTCACCTAGAGGACAATCAATTACCTAAGTGGGATTCAAAAGCAAAAATGTTTGTTAGCTCAGGCATACTTTCCCAAGAAGATGGTGAAATAAGAATGGCACCTAACTCCTTGACCTTTGGGCACCACAAAATGTCCTCTGCTATAGCAGATGTTACCTTCACTAACCTAGGCACAAACGAAAACTACTCGTTTGTTTATCAGACAATGAACCCTGGCGATAAGGATGCTTACATACGTGAAATAGATAGCAATATAGAAGAGATCGTAAGGGTACCTGTGGGGACAGATGATGTTGTGAACCCATCAAATACAGTTACAGTAGATGTTGATGAAATATTCCTAGGCGGTACTTTTATACTATCACAAGATACACAAGATGTGTTAATGGAGGTATATAATTTTGATAATCCTACCCAACTTATTTGGAGAGATAACTTAGGTGATATGCCTTCAGGAGAAAACACAGTTACATTCGATACACCATTTAAATGTAGAGCTGGTTTTAAGTATATTATCCATCTACTAAGTAAGGCTGGGGACTTAGTAGCAAAAGGTTCAGGTAGCTCTTTCAGTTGGAAGATTAACCGTGCGAAAATGTACATTAAAAAGGTTGCCTCTCAAGATTGGGTAAATGAGCAGCCGTTTATTGATGACGTTACTTTAACTGGTAACATGTTTACCTTTACTATGGCGAATGGGGCAACTAAATCTGTTACTTTACCTCCAGCTACAGGTGGGGTCGCATCACCTTACGACTTTACTAGCTTTAATTCTGATAAAACTCCTGTTCTATCAGAGGTTGCGAATAGTACCCCAGTATACCACTTTAATGGTCTAGCAGATTCTACCTTTACGTTACCATCTACGGACATTTTACCACCTAATAAAAACATCGCCCTACTAATTAGAAATGCAAGCCCTAATAATTCTTCCCTAAGTGTAGTGTCTAGTGGGACTGATTTTATAGATAGAGCAAACATTCGTACACTAAATATACCGCAAGGTATGCTGGCCATGTTTATAAGTGATTATACTAGAGACCTATGGCACATGGTACCTCTTGATTCAGCTGGTAGTGGACAGAATCTAAATACTAATCAAATAGTTAAGAGTGTACAACCAACAGCAAGTGGTACTGGTCTAGTTACTACATACTACGACGACTCAAGTATAACTACCACGTTCGATCCTTGGGTTTCGGATATTAATAAACTTAATGACGCTGTAGATACGCTACAAAGACAACTTAAATCTAAGACTAGATACTATGTGTATAAGGGAAGTAACACGCCACCACCAGATATCCCAACTGGAGCTAGGGGCGGGTACTACTTTACCTTTACAGGTACTTCAGCTGATGTAGTATTACCAGCACCAAGCAGAACAGCGGCAATAGCTGATGGTACAATCCTGTTTGTTGATAATAACAGTACAAGCTATAAAGTAACCGTGACAACTACAGGCTCAGATACTATTGCTGGGGCTACTAAGGTAGATCTATCAGCTGAGTCAGCAGCTTGGTACGTTCGTAATGGAAATAACTGGCAAGAACTGTATTCTGGCTACCTACCAGAATCGCATAAGAAGCTAATAGACGAGATAAAAACTCTAATCTCGGCAAGTAATACCTTTATGCGAGATGTTGGCGTACAAGGTGACGATCCTAATGCTGGCAAAGTAGAGTGTACAGAGCTAGAGTTTCATAAGTGTAAGGTAACTCAAGATACCACGGTACCTACTAAAGGTATTGTTGAGTTTGAAGGTACAACGTTTGTGAACCCAGACGGTTCAAAGATAACCACAGATGTTATTAAATTGGTAGGTATGGAGTTGGTTGACCCACTAGACGGGACACCTCCTAAATTACTACTTCATGGTGGTGGTAACTTGCCTACTCCGCACCCAACAAGTGCGTATGGTTTCTTCAGTCCAGATGCCGATACACCTGATTCTATAGACCCTAATAGTCTTCCTGTGTTTAGGAACGGAAGGGTTACACTGCATAAAGATACTACTGATGCACAGTATGCATATGTTATATTACCGCCTGGTGAAGGTACTGATGCTGAGAGAATTGGTGAGCTTGGTGGTTTACCATCTTACTGGGCTAAGAGTGATAAAATCTATAATATTGGTGGTGTTTCTAGAACATATACTGTGTTCCGCTCTCCTTACCCATTCAGGGAACAGGACTTAACATTAGTAATATATCATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
aab7e3501c2e5e0dd59c2d63ebd8f179ccc2b305c8a095fd7c2d81ba9bf6cd23
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2958
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50