Protein

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Genbank accession
XWX23699.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MAVKYDIGNNEIVLHLREGKYITGFTTVGGYDKELGQVKVNREILPAYFFDNFAYERYLYYSKPEEVIENKNYVPPQINDDDEESQQITVPKEQYDSLKEELELMRKQQEAMMEMLQKLLGQKG
Physico‐chemical
properties
protein length:124 AA
molecular weight: 14611,34700 Da
isoelectric point:4,70453
aromaticity:0,11290
hydropathy:-0,76774

Domains

Domains [InterPro]
DC_0295
STR
4–124
DC_0295
IPR021358
STR
18–77
IPR021358 Coil
XWX23699.1
1 124
Architecture
STR
STR 4-124
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage EMS22-2
[NCBI] 		3440216 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus aureus
[NCBI] 		1280 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XWX23699.1 [NCBI]
Genbank nucleotide accession
PV775412.1 [NCBI]
CDS location
range 84259 -> 84633
strand +
CDS
ATGGCTGTTAAATATGATATAGGTAATAATGAGATAGTATTACATTTAAGAGAAGGTAAATATATAACAGGGTTTACAACAGTAGGAGGGTATGATAAGGAGTTAGGACAAGTAAAAGTTAATAGAGAAATCTTACCTGCTTACTTCTTTGATAATTTTGCCTATGAAAGATATTTGTATTATAGTAAACCTGAAGAGGTTATAGAAAATAAAAACTATGTACCACCACAAATCAATGATGATGATGAGGAATCCCAACAAATTACTGTACCTAAAGAACAATATGATAGTTTAAAAGAAGAACTAGAGCTTATGAGAAAACAACAAGAAGCTATGATGGAAATGCTTCAAAAGCTCTTAGGTCAAAAGGGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
452d32b2d07f7d49d4a3cf2957f532192e06c9c65a4d624477a724ee54f82b32
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5365
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Development of phage formulation for phagotherapy against mastitis infections, evaluation of efficacy with in vitro and in vivo applications Dalgic,C., Tasdurmazli,S., Erdogdu,B. and Ozbek,T. 2020 — GenBank