Protein

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Genbank accession
VOH56127.1 [GenBank]
Protein name
baseplate hub subunit and tail lysozyme
RBP type
TSP
Evidence RBPdetect2
Probability 0,50
Protein sequence
MSTYSRTVGVNPSASKTPTGRAQKYYGMYIGFVKDNVDSNRMGRLRVWVPEFGTDPSDESGWLLVGYCSPFAGATNPMTIGGSQDVSAFHETQTSYGMWAVPPDLENQVAVMFANGDPAKGFWFGCIWQQQMNHMIPAVAGSVNNYETAGKSLPVGEYNKNTLEKVNAQTINKPVASLAQGLKTQGLINDNIRGVSSSSARREAPSQVFGILTPGPVIDGANARRHGGHQFVMDDAPTSEHITLRTRSGAQIRLDETNGIIYIINKLGTAWIELDNSGNVDVFGAKSGSLRFMEDFNIRADRDINIEAGRNINIKASKDYTTVSTGGIAPELTGQGGDIFIQANNNLNIQSQKDTLLNQLGGSLHNTAGVDISLKAGSNYNLQAAGQIATATNGTYGLSAGGDIIELGANIHMNGPQPPTPDSPTEASTPTTNGKTNILPEFSDANRYNRMSQPGVTTIVSRFNTFEPCPEHKNKGA
Physico‐chemical
properties
protein length:477 AA
molecular weight: 51112,32020 Da
isoelectric point:5,94049
aromaticity:0,07338
hydropathy:-0,42034

Domains

Domains [InterPro]
SSF69255
ATT
25–126
SSF69255 DC_1827 SSF69349 DC_1558
SSF69255
ATT
25–130
SSF69255 SSF69349
VOH56127.1
1 477
Architecture
ATT
STR
RBD
ATT 25-130 | STR 131-416 | RBD 417-477
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
VOH56127.1
1 477
Domain Start End Length (AA) Confidence
N-terminal 1 256 256 0,1488
Central domain 257 455 200 0,3662
C-terminal 456 477 21 0,9972
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-256
Central
257-455
C-terminal
456-477

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeM_MIJ3
[NCBI] 		2567864 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
VOH56127.1 [NCBI]
Genbank nucleotide accession
LR588166 [NCBI]
CDS location
range 261370 -> 262803
strand -
CDS
ATGAGTACATATTCTAGAACAGTAGGTGTAAATCCATCTGCTAGCAAAACACCAACTGGCAGAGCACAAAAATATTACGGAATGTATATTGGGTTTGTCAAAGATAATGTCGATAGCAACAGAATGGGAAGACTTAGGGTTTGGGTCCCGGAATTCGGTACTGATCCGAGCGATGAATCTGGTTGGTTGTTAGTTGGATACTGTTCGCCATTTGCTGGCGCAACTAATCCTATGACAATCGGCGGTTCACAAGATGTATCTGCATTCCACGAAACACAAACATCTTACGGTATGTGGGCAGTTCCGCCAGATCTCGAAAATCAGGTAGCTGTAATGTTTGCTAATGGCGACCCTGCAAAGGGATTTTGGTTTGGATGCATATGGCAACAACAGATGAATCATATGATTCCTGCAGTTGCTGGCAGTGTTAATAATTATGAGACAGCAGGAAAATCTTTACCTGTAGGTGAATATAATAAAAACACACTAGAAAAAGTAAATGCACAAACTATTAATAAACCTGTTGCTAGTCTTGCCCAAGGATTAAAAACGCAAGGGCTTATTAACGATAATATACGGGGTGTATCTTCATCATCTGCACGCAGGGAAGCACCTAGTCAGGTATTCGGTATTCTTACCCCAGGTCCAGTAATAGACGGTGCAAATGCAAGAAGGCATGGCGGTCATCAGTTCGTTATGGATGATGCACCCACATCCGAACATATCACATTAAGAACTAGATCTGGTGCTCAAATAAGATTAGATGAAACTAATGGAATAATTTATATAATTAATAAATTGGGCACTGCTTGGATAGAATTAGATAACTCGGGCAACGTAGATGTATTTGGTGCAAAATCCGGATCTTTACGTTTTATGGAAGATTTCAATATACGAGCAGATAGAGATATTAATATAGAAGCAGGAAGAAATATAAACATTAAAGCATCTAAAGACTATACTACTGTTTCTACCGGAGGCATAGCCCCGGAACTAACAGGTCAAGGCGGAGATATATTTATACAAGCTAATAATAATTTAAATATTCAATCGCAAAAAGATACATTACTAAATCAATTAGGAGGCAGTTTGCATAACACTGCCGGAGTTGATATATCTTTAAAAGCAGGTTCTAATTATAATTTACAAGCTGCAGGACAGATAGCAACTGCTACTAACGGAACATATGGGTTAAGTGCAGGCGGGGATATTATCGAGTTAGGTGCTAATATACATATGAACGGTCCGCAGCCGCCAACGCCTGATTCTCCTACTGAAGCAAGTACACCTACTACTAATGGCAAAACTAATATATTGCCTGAGTTTAGTGATGCAAATAGATATAATAGAATGTCTCAACCAGGAGTAACTACTATAGTATCTAGATTTAATACATTCGAACCGTGTCCCGAGCACAAAAATAAAGGAGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
259f4b71abb97ed9c6c081ae3cadc0ec1752ac918ddadf2a9c8a9d34143db394
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5904
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50