Protein

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Genbank accession
YP_009792785.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MRGVVFPFGGAVAPRGFLMCEGQAVSRTAYAALFATITLSATGNTTNGSASVTVASTTNLQVGMPISGPGIQSATTITAINIGTSTLTLSKNATATASGVVLVVAPHGVGDGSTTFNVPDLRGEFIRGLDRGRGADPARVLGSRQKGSLTHWDPHSANPDPTFFRTSDGTPSDMFGVDPLVDQAYTGYTQFFTLNPGSVSNNGGLGITRPRNVSMNYIIKT
Physico‐chemical
properties
protein length:221 AA
molecular weight: 22816,34980 Da
isoelectric point:9,35244
aromaticity:0,07240
hydropathy:-0,00995

Domains

Domains [InterPro]
IPR037053
ATT
2–50
IPR037053 IPR011083
SSF88874
STR
2–220
SSF88874
DC_1413
STR
2–221
DC_1413
IPR011083
ATT
3–37
IPR011083
YP_009792785.1
1 221
Architecture
ATT
STR
ATT
STR
ATT 2-50 | STR 51-106 | ATT 107-126 | STR 127-221
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Bordetella phage vB_BbrM_PHB04
[NCBI] 		2029657 Uroviricota > Caudoviricetes > Phabquatrovirus >
Host Bordetella bronchiseptica
[NCBI] 		518 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009792785.1 [NCBI]
Genbank nucleotide accession
NC_047861.1 [NCBI]
CDS location
range 90408 -> 91073
strand -
CDS
ATGCGCGGTGTCGTGTTCCCATTCGGCGGCGCGGTTGCGCCGCGCGGTTTCCTGATGTGCGAAGGGCAGGCGGTCAGCCGCACGGCATACGCGGCCCTGTTTGCAACGATTACCCTCTCCGCGACGGGCAATACGACGAACGGTTCGGCGTCTGTCACTGTTGCCTCGACGACCAACTTGCAGGTCGGCATGCCGATCAGTGGCCCGGGCATCCAGTCTGCCACGACGATCACGGCCATCAATATTGGCACGAGCACGCTGACCCTCTCCAAGAACGCGACTGCGACGGCATCGGGTGTCGTGCTCGTGGTGGCTCCGCATGGCGTGGGTGACGGCAGCACCACGTTTAACGTGCCGGATCTGCGCGGCGAATTCATTCGCGGTCTGGATCGAGGCCGAGGGGCAGATCCGGCGCGCGTTCTTGGATCTCGCCAAAAGGGGTCGCTCACGCACTGGGATCCGCACTCTGCTAATCCAGATCCCACGTTCTTTCGCACATCCGACGGAACTCCATCCGATATGTTTGGGGTCGACCCTCTTGTTGACCAAGCATATACTGGCTACACGCAGTTTTTTACGCTCAACCCTGGCAGCGTGAGCAACAATGGTGGCCTCGGAATTACTCGGCCGCGAAACGTTTCGATGAACTATATTATCAAGACGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4ca518cf391401e3c84339d48e85d5748ee81edc2f3c490d5483eb20c19248bb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7914
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of a novel bacteriophage infecting Bordetella bronchiseptica Chen,Y., Song,J. and Wu,B. 2018-09-18 — GenBank