Protein

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Genbank accession
XOD30399.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,85
TF
Evidence RBPdetect2
Probability 0,80
Protein sequence
MSISFNNPLDTMTSTGANGSLELIVLGGTPTNPRPIRFNSSSVILPVQALPAGEQGAMVFDRNELVLKYHNGTSWIAVYDTDTILEPIRISLDEVNRKLNLKVETVTYSSSAVPSASISGTNLNIVFPIPSSSGTGPTGLYTSMKPGAITQYSLTSGQTVASIREQMSGVTNGQSGRNGSQGSPWKTSDGWCFADGMWWTWDGENGTITKQVPNLNQEAYLKGITTSGVTKTDSVIASSASISGTAISIAQLPPHSFSFSGTTGAAGRHGHSQALKGMDRSGLNALTSSNDNGIPTVINNINEAPDHVHSFSGSTNTVGSGQAHSHGISNIDVPHFNVAYLYNIAESNVALSEKVANTRYVLKTGDTMSGSLSIANSATIRSNDTSLVLYFRNAAGTTERAAIYHSSSTNTLRLRSNGGSEVTINSSGVLYAPSVTGASLSISGNTATVASKNIVRSINGNNADASGNVTLTLGAVQDVRLSKRTSTRSVPDSSWIYAPEGATLDGLFISVNGSSGTHVEGYSWRYTQKLVNGVWTNVVVES
Physico‐chemical
properties
protein length:542 AA
molecular weight: 56862,25000 Da
isoelectric point:6,60034
aromaticity:0,06458
hydropathy:-0,19188

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XOD30399.1
1 542
Domain Start End Length (AA) Confidence
N-terminal 1 177 177 0,9485
Central domain 178 376 200 0,0955
C-terminal 377 542 165 0,9311
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-177
Central
178-376
C-terminal
377-542

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage EC.P1
[NCBI] 		3390897 Viruses > unclassified bacterial viruses >
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XOD30399.1 [NCBI]
Genbank nucleotide accession
PQ657772.1 [NCBI]
CDS location
range 156227 -> 157855
strand -
CDS
ATGAGCATAAGTTTTAATAACCCACTGGATACTATGACTAGTACTGGTGCTAATGGATCTTTAGAACTAATAGTGCTTGGTGGTACACCAACTAATCCAAGACCTATTCGTTTTAATTCATCTTCTGTCATTTTACCAGTACAGGCATTGCCAGCAGGTGAGCAAGGTGCTATGGTATTTGATAGAAATGAGTTGGTGTTAAAATACCACAACGGGACAAGTTGGATTGCAGTATACGATACTGATACAATTCTTGAACCAATCCGTATTTCACTCGATGAAGTGAACCGTAAACTGAATTTAAAAGTTGAAACAGTAACATATAGTAGTAGTGCTGTTCCAAGTGCGAGCATTAGTGGTACGAATTTAAATATCGTATTCCCTATTCCATCAAGTAGCGGTACTGGCCCAACAGGTCTTTATACTTCAATGAAGCCTGGTGCAATTACCCAGTACTCATTGACTTCTGGACAAACTGTTGCTAGTATTCGTGAACAGATGTCTGGTGTGACCAATGGTCAAAGTGGTCGTAATGGTTCACAAGGTTCTCCGTGGAAAACTTCTGACGGTTGGTGTTTTGCTGATGGAATGTGGTGGACATGGGATGGTGAAAATGGTACAATCACAAAACAAGTTCCAAATCTTAACCAAGAAGCATACTTGAAAGGTATTACCACATCAGGCGTAACTAAAACTGATAGTGTGATTGCAAGTAGTGCATCAATTAGTGGTACTGCGATATCAATTGCTCAACTTCCACCGCACTCATTTAGTTTCAGTGGAACTACTGGTGCTGCTGGTCGTCATGGTCATAGCCAAGCACTAAAAGGTATGGACAGAAGTGGTCTTAATGCGTTAACATCCAGTAACGACAACGGAATCCCAACTGTAATTAATAACATTAACGAAGCACCTGATCACGTGCATAGTTTCAGTGGTTCTACGAATACTGTTGGTAGTGGTCAAGCACACAGCCACGGAATTAGCAATATTGACGTACCACACTTTAATGTGGCATACTTATATAACATTGCAGAGTCAAACGTTGCATTGAGTGAAAAAGTTGCAAACACCCGTTATGTACTTAAAACTGGTGATACAATGTCTGGTTCATTGAGTATCGCAAACAGTGCAACAATTCGTTCGAATGATACTTCATTAGTACTTTACTTCCGTAACGCGGCAGGAACTACTGAACGTGCAGCAATTTATCACAGTTCATCAACAAATACATTACGTTTGAGAAGTAATGGTGGTTCTGAAGTTACAATTAACTCTTCTGGTGTACTTTATGCTCCATCAGTAACTGGTGCATCATTGTCTATTTCTGGAAACACAGCAACTGTTGCTAGTAAAAACATCGTCAGATCTATTAACGGTAACAACGCTGATGCAAGCGGCAACGTAACTTTAACACTGGGTGCTGTACAAGATGTTCGTTTAAGTAAAAGAACATCTACGCGAAGTGTTCCTGATTCTTCTTGGATCTATGCACCAGAAGGTGCTACGCTTGATGGGTTGTTTATTTCCGTAAATGGGAGTTCTGGTACACACGTTGAAGGTTATAGTTGGAGATATACACAAAAATTAGTCAATGGTGTATGGACTAACGTAGTAGTGGAGTCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
753e2b36ee3545c7931dd0a3fbc3c578f8bf5d3ea2c603ffb06f59c09f3783a4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5958
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50