Protein

View in Explore
Genbank accession
XCH41962.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MKLNITAPGLFFNRSGDRVTVDQIVLENSAGAVVSFPVKGRIWKMYRGAYRPREFKIWTASGKFYAGEQSRSPWDIVGEVVADDVRPVYWQDLTDDQKAQAAAKYHNGEGTPGDYFTYTPDQFIVINGDVYDLDADASVYEVEGLKGHVRILESSKADGAALAVQCVDGWRVISVYRVQVTS
Physico‐chemical
properties
protein length:182 AA
molecular weight: 20264,47150 Da
isoelectric point:5,19749
aromaticity:0,12088
hydropathy:-0,27582

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage PMBT21
[NCBI] 		3153512 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCH41962.1 [NCBI]
Genbank nucleotide accession
PP810244.1 [NCBI]
CDS location
range 55621 -> 56169
strand +
CDS
ATGAAACTGAATATTACCGCGCCGGGCCTTTTCTTTAATCGTAGCGGCGACCGCGTCACCGTGGATCAAATCGTTTTAGAGAATAGCGCCGGGGCCGTCGTGTCATTCCCGGTTAAGGGGCGGATCTGGAAAATGTACCGGGGCGCATATCGTCCGCGTGAGTTTAAGATCTGGACGGCGTCGGGCAAGTTTTACGCGGGCGAACAATCCCGATCACCGTGGGATATTGTCGGCGAGGTTGTCGCGGACGATGTGCGCCCGGTCTACTGGCAAGATCTGACCGATGACCAGAAAGCGCAAGCCGCCGCCAAATATCACAACGGTGAAGGCACGCCGGGCGATTATTTCACCTATACGCCGGATCAATTCATTGTAATTAATGGTGACGTGTACGATCTGGACGCCGACGCGTCAGTCTATGAGGTCGAAGGGTTAAAAGGTCATGTGCGCATACTGGAAAGCTCAAAGGCGGACGGGGCCGCGCTGGCGGTGCAATGTGTGGACGGCTGGCGGGTAATAAGCGTTTACCGCGTACAGGTGACATCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
365fca403f46946f677e745e3f67dd7091f23b45469b84390b1a307fed8bf02e
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7270
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
This phage originates from the Bacteriophage catalogue of the Bacteriophage Competence Centre, Department of Microbiology und Biotechnology, Max Rubner-Institut, Kiel, Germany Sprotte,S. and Brinks,E. 2020-12-18 — GenBank