Protein

View in Explore
Genbank accession
XYH44932.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MASLINLLISGSKFKIIDERNNSVKWKDLVIIKTTITVPSEVSDLPFEDSSLSSENLTMERLRADMQVGKVITPIAINVIAKVPNIAMLESILQLYSDLGHTLTITTKGIYAEKMVLTTVMIDQNSESVSATAVELVFQQGGEVEDKAYDPIQPGDDPTYGIHVQASEGLISSVDTFYNKISKNINFVS
Physico‐chemical
properties
protein length:189 AA
molecular weight: 20725,49260 Da
isoelectric point:4,65275
aromaticity:0,05820
hydropathy:0,06296

Domains

Domains [InterPro]
IPR054442
ATT
4–182
IPR054442
XYH44932.1
1 189
Architecture
ATT
ATT 4-182 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage JSF39
[NCBI] 		3446107 No lineage information
Host Vibrio cholerae
[NCBI] 		666 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYH44932.1 [NCBI]
Genbank nucleotide accession
PV834959.1 [NCBI]
CDS location
range 8203 -> 8772
strand -
CDS
ATGGCTTCATTGATTAATCTTCTTATTTCCGGATCGAAGTTCAAAATTATTGACGAAAGAAACAATTCCGTAAAATGGAAAGATCTAGTCATAATTAAGACGACGATAACCGTACCCTCAGAAGTTTCTGATTTGCCTTTTGAAGATTCTAGTTTGTCTTCAGAAAATCTCACCATGGAGAGATTAAGGGCTGATATGCAAGTCGGCAAAGTTATAACCCCGATCGCCATAAACGTTATAGCGAAAGTGCCGAACATTGCGATGTTAGAAAGCATTCTCCAATTATATTCCGATCTCGGCCACACGTTGACGATCACCACAAAAGGCATTTACGCCGAAAAGATGGTCTTAACAACTGTCATGATCGACCAGAACTCCGAAAGCGTATCGGCTACTGCTGTCGAGTTAGTATTCCAACAAGGCGGCGAAGTAGAAGACAAAGCGTATGACCCGATCCAGCCGGGAGACGACCCGACGTATGGGATTCACGTTCAGGCGTCAGAAGGCTTGATTTCGAGCGTCGATACGTTCTATAATAAAATTTCCAAAAATATCAACTTTGTGAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d946013cb3d8f6f8f7cd810de1a8e7e6184114612e1bd9e558c6782cd415123c
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6016
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50