Protein

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Genbank accession
AWY02819.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MSEYNPTFDIEVTSGVSPTFDLSVDGEGGVNQEFLDIINVEISKFNTPSFDIKIAFDLEPAFTEYTTVGVSSIWDRSKSCDVTTNTEYATSTPISEFISLVKGEGFYYKHVGTDIKYSVTTVLFSDTNVNSKSTIDPLQSTTNVTLLVYDGLRYVYGNYNVKNKIVYSKLESLTLTHWTNGKPVNHSHLLKWDNDFEHIHYLVSLNADYKTESLDYVQTVRWGYSLNKFVVGGVTTVPSTPEEDVVEPPDGEIIEHIDYEVYRVVNSVLITETATGQSVTFDSFSIQTDIESFAWTVQFDVLDKTSFDLIRPLGRSLKTVDIQINDETYTLVVAKGSIVRKHGEVAYRCSGWSRTKLLADPYASKRSFTDTQTRTAAQIVDVELVGTGFTYTWSTVDWSVPAGVHSYQDKTPLGAVLTLAESVGAVVIPHPTLMQFDVRPYYPVSPWQWDSADLDRSMNELQFFEISNDPVPKPNPDGVYVYGQDDNGVGVKAVRNGKPGQALLSDVVNKYITTNVAGQERGRVEVSKNCFIDKYTMTTYVDENGIIKPHELVQFTDTEGGTWRGMVLSTSVKCARVGTALLQTIQVARFYDD
Physico‐chemical
properties
protein length:593 AA
molecular weight: 66251,21300 Da
isoelectric point:4,74807
aromaticity:0,11130
hydropathy:-0,24199

Domains

Domains [InterPro]
SSF69279
STR
270–429
SSF69279
SSF69279
STR
281–429
SSF69279
AWY02819.1
1 593
Architecture
STR
STR 270-429 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AWY02819.1
1 593
Domain Start End Length (AA) Confidence
N-terminal 1 587 587 0,8395
Central domain 588 587 1 0,0270
C-terminal 588 593 5 0,8900
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-587
Central
588-587
C-terminal
588-593

Taxonomy

  Name Taxonomy ID Lineage
Phage Alteromonas phage JH01
[NCBI] 		2249314 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Alteromonas marina
[NCBI] 		203795 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Alteromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AWY02819.1 [NCBI]
Genbank nucleotide accession
MH445500 [NCBI]
CDS location
range 20674 -> 22455
strand +
CDS
ATGAGTGAATATAATCCTACTTTTGATATTGAAGTCACTAGTGGGGTCAGCCCTACGTTCGACCTGTCAGTAGACGGTGAAGGTGGTGTAAATCAAGAATTTCTTGATATTATCAATGTAGAAATATCAAAATTTAACACCCCCTCGTTCGACATTAAAATTGCTTTTGATTTAGAACCTGCTTTCACAGAATACACAACCGTAGGGGTTTCTAGTATTTGGGACAGGTCTAAATCTTGTGATGTAACTACAAACACAGAATACGCGACTAGTACCCCTATTTCAGAATTTATAAGCTTAGTCAAAGGTGAAGGGTTTTATTACAAGCACGTTGGTACGGACATTAAGTACAGTGTGACCACTGTGCTGTTCAGCGACACTAATGTTAATAGCAAGTCTACTATAGACCCTCTACAATCAACCACTAACGTTACGCTACTGGTTTACGATGGTCTTAGGTACGTATACGGTAATTACAATGTAAAGAATAAGATTGTTTATTCTAAATTAGAAAGCCTCACTTTGACTCATTGGACTAACGGTAAACCTGTTAACCATTCGCACCTGCTGAAGTGGGATAATGACTTTGAGCATATTCACTATCTAGTAAGCCTGAACGCTGATTACAAGACCGAAAGCCTTGATTACGTTCAAACAGTCAGGTGGGGGTACAGCCTTAACAAGTTCGTTGTAGGTGGGGTTACAACAGTTCCTAGCACACCAGAAGAAGACGTAGTTGAACCCCCTGATGGTGAAATAATAGAACACATAGATTATGAGGTATACAGGGTCGTGAATAGCGTATTAATAACCGAAACGGCTACAGGTCAGAGCGTGACATTTGACAGCTTTTCAATACAGACCGATATAGAATCGTTCGCGTGGACGGTTCAATTCGATGTACTAGACAAGACCAGCTTTGATCTCATTAGACCGTTAGGAAGGTCGCTGAAGACGGTAGACATTCAGATTAACGATGAAACATACACCTTGGTTGTGGCTAAGGGTAGTATCGTGAGAAAGCATGGTGAGGTGGCATATCGTTGTAGTGGTTGGTCAAGAACCAAGTTGTTAGCTGACCCTTACGCCAGCAAGCGCAGCTTCACAGACACGCAGACACGCACTGCTGCGCAGATAGTTGATGTTGAACTGGTGGGTACGGGCTTCACGTACACATGGTCTACCGTTGACTGGTCAGTACCAGCAGGTGTCCATAGTTATCAAGATAAGACCCCACTAGGTGCAGTGTTGACATTAGCAGAATCAGTAGGTGCAGTGGTGATACCGCACCCTACATTGATGCAATTTGATGTTAGACCGTACTACCCTGTGAGTCCTTGGCAATGGGATAGTGCTGACCTTGACCGCAGCATGAATGAGTTGCAGTTTTTTGAGATAAGCAATGACCCTGTACCTAAACCAAACCCTGACGGTGTGTATGTCTATGGTCAGGATGATAATGGGGTCGGTGTAAAAGCAGTACGTAACGGTAAACCGGGTCAAGCGTTGCTATCAGACGTAGTGAACAAATACATCACCACTAACGTAGCAGGTCAAGAGCGAGGTAGGGTGGAAGTGTCTAAAAATTGCTTTATAGACAAATACACCATGACCACGTATGTTGATGAAAACGGCATTATTAAACCGCACGAATTGGTTCAATTCACAGATACCGAAGGTGGTACATGGCGTGGTATGGTGCTGTCTACAAGTGTTAAGTGTGCACGCGTTGGAACTGCGTTGCTTCAAACAATTCAGGTTGCGAGATTTTACGATGATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
04333a02e407cb95d73c071e4d5b7225e7cba4cb46981d6dcd164619bb3210a9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6450
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and Genetic Analysis of a Novel Alteromonas Phage JH01 from the Yellow Sea Xiao,S. 2019-08-01 — GenBank