Protein

View in Explore
Genbank accession
ANJ20687.1 [GenBank]
Protein name
virion protein
RBP type
TF
Evidence RBPdetect
Probability 0,54
TF
Evidence RBPdetect2
Probability 0,76
Protein sequence
MAERRPLVLVNGAFQELPVGDTLPGAGGLQNNLAATTAPAVGNDNTEGYAVGSVWIDVTNDNSYVCLDASTGAAVWGQTNGAGGGASNFLSLTDTPGAFGTAGQFLAINSAADAIEFVDAPSGGGGGGASTKKGFFAWGNASAAGTLANWNNEVWDSEDAFDPVTGIYTVPASLDGEYLLIIFNVRGNTGGAIYIQKDTAGNNTFQNWAVADLGSSQASASVIIQVATGDQIRAQTFGFSAQNETRTNFGAFVMGSGGGSSSGGGTSSGIYAEVTYAANHSPTTNVFEQLAFDQVTLDADSIYDSPSGHFIIPESMNDTNVILQLTTQATNDNSGAVECIIEKSTDGGTTWSRLGQSPNGGIHFFGITNAIAVDRASTGDRYRAMFLSTNAITLRVDNNQTRFTLAQAGGGSSAQNATTDVVFDFDATGEADTTTPIDKGVQNLAVTNNGVAVLSERYEFESTNGNGEWFSVPAAATEKLGNSDFVLTVERLSFDAFPQQQGVVGEWEATGNQRSWILFHSAGQLLFYGSSNGASQDVTLSYNFNAANTEIDVIVRRVGGTITLEINGAVEATANPGAGYTFFDSSANTIEFGTYAPGSRDLDGSFRRATLTITGANLDAGVPISFLTLPDTPETYGTVGQMLVVNGATNGLEWTDVPADELPALGAAGQILAVNGAANGVEWIDAPAGGSGASYGTPDYGNPGGTGNRTGLITASTNAVLGGGTTVDRSIDGAVGTNSASAWYWNSGQNSGLYVRWDFGSKQRIDQIRWQQNNTAGHGTWRVEGSDDASTWTPVSSNFALGGSTDQTIDLDLIPADTGYRYYQIAWQSGSSTSNSPWLQETEFRLAPESNPSELPAGGTAGQLLAKVDATDGNVEWIDPPAGGSGEPNVTSWNDLAAGVTPTNWIVSSGTPVTMASKGSLTPRTGAVFAGVVAFEASAVMYEDITLETRHQGMYVDLTYFHGRDNNVNDNVRVDLAFLDSGSTQISTVGTTDGNAVAENTWERVSLNDTLIPDNAAFIRVTVTFTRGQGSELNAYIDDINLRFKANASSPDELPALGTPGQVLAVNGAGDGVEWKADETGAESPATGDGVSDSWTVTLATANSTSAFALKGNIVTMTEDRWLTAVDMGHSTNNLGQTVDLFVAKLSEVNPGTITEIVLDVGQVSISDPIDDTRFTVPNGGLHLENGVTYVIAFVRTDATGADALQLDFPSGGTEASSFFTHNGTARAALNAPALTNTVYFNNTAAVKMDIITEGYVAPASPGDMVQTEITGATYSTQVSDFAGNVVRRMNSASGQTVTVEPDITGQPVTFIQAGAGTVTFAAGTGVTINSLNSNLAIAGQYGSVTLIPDVDTANTFYLVGALA
Physico‐chemical
properties
protein length:1364 AA
molecular weight: 141716,96480 Da
isoelectric point:4,11329
aromaticity:0,08578
hydropathy:-0,12925

Domains

Domains [InterPro]
DC_1385
ATT
8–175
DC_1385 DC_1385 G3DSA:2.60.120.260 DC_1166
IPR008983
RBD
132–255
IPR008983 DC_1385 DC_0814
IPR008983
RBD
140–252
IPR008983 IPR008979
ANJ20687.1
1 1364
Architecture
ATT
RBD
ATT
STR
STR
ATT 8-175 | RBD 176-238 | ATT 239-752 | STR 753-1034 | STR 1125-1364
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Dinoroseobacter phage DS-1410Ws-06
[NCBI] 		1815983 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Dinoroseobacter shibae
[NCBI] 		215813 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Rhodobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ANJ20687.1 [NCBI]
Genbank nucleotide accession
KU885988 [NCBI]
CDS location
range 15683 -> 19777
strand +
CDS
ATGGCTGAACGTCGTCCTCTGGTCCTCGTCAACGGGGCCTTTCAAGAACTTCCCGTAGGGGACACCCTCCCCGGTGCTGGTGGTCTGCAAAACAACCTTGCAGCCACCACTGCACCTGCTGTCGGAAACGACAACACTGAAGGTTATGCTGTTGGTTCAGTCTGGATCGACGTAACCAATGACAATTCCTATGTCTGTCTCGATGCTTCGACAGGTGCTGCTGTCTGGGGACAAACCAACGGAGCAGGTGGAGGGGCTTCTAACTTCCTCTCACTGACAGACACTCCCGGTGCATTCGGAACTGCTGGACAGTTTCTGGCCATCAACAGTGCAGCAGATGCAATCGAATTCGTAGACGCTCCTTCTGGTGGAGGCGGTGGTGGTGCATCAACCAAGAAAGGTTTCTTTGCTTGGGGTAACGCTTCTGCTGCTGGTACTCTTGCCAACTGGAACAATGAAGTCTGGGACTCTGAAGACGCATTTGATCCAGTTACTGGTATCTACACTGTTCCAGCATCGCTGGATGGTGAGTACCTGCTCATCATCTTCAACGTCCGTGGTAACACAGGCGGTGCAATCTACATTCAAAAAGACACTGCTGGTAATAACACCTTCCAGAACTGGGCTGTTGCCGATCTCGGATCCAGCCAAGCCAGTGCATCTGTAATCATTCAAGTAGCCACTGGTGATCAGATTCGTGCTCAAACCTTTGGTTTTTCTGCACAAAACGAAACCCGTACAAACTTCGGTGCCTTTGTTATGGGCAGTGGTGGTGGATCTTCCAGTGGTGGAGGTACGTCTTCAGGTATCTACGCTGAAGTGACTTATGCTGCAAACCATTCACCAACTACAAACGTCTTTGAACAACTGGCCTTCGATCAGGTGACTCTGGATGCTGACAGCATTTATGACAGCCCATCAGGTCACTTCATCATTCCTGAGTCAATGAATGACACCAATGTCATCTTGCAACTGACTACTCAGGCTACCAACGACAACTCTGGTGCAGTCGAATGTATCATCGAAAAATCCACTGATGGTGGAACCACTTGGAGTCGTCTAGGACAGTCTCCAAACGGTGGTATCCACTTCTTTGGTATTACCAATGCCATTGCCGTAGATCGTGCATCTACAGGTGATCGGTATCGAGCTATGTTCTTGTCTACAAATGCCATCACTCTTCGAGTTGATAACAACCAGACTCGTTTTACTCTGGCTCAAGCTGGTGGTGGTTCTTCTGCTCAAAATGCGACTACTGATGTCGTATTCGATTTCGATGCGACTGGCGAAGCCGATACCACTACACCAATCGACAAAGGTGTTCAAAACTTGGCTGTCACCAATAATGGTGTTGCAGTCCTGTCTGAACGCTACGAGTTTGAATCCACTAACGGTAACGGTGAGTGGTTTTCTGTTCCTGCTGCTGCTACAGAAAAACTCGGAAACTCTGATTTTGTACTGACAGTTGAACGACTTAGCTTCGATGCATTCCCTCAACAGCAAGGTGTTGTTGGTGAATGGGAAGCCACAGGAAACCAACGGTCTTGGATCCTGTTCCACAGTGCAGGACAGCTTCTGTTTTATGGTTCGTCCAATGGTGCAAGCCAAGATGTCACTCTGTCTTATAACTTCAACGCAGCCAACACAGAGATTGATGTGATTGTCCGTCGTGTCGGTGGAACCATCACTCTCGAAATCAATGGTGCAGTTGAAGCTACAGCTAACCCCGGAGCAGGTTATACCTTCTTCGATTCCTCAGCCAATACGATTGAATTCGGTACATACGCTCCCGGCAGCCGTGATCTCGATGGTTCATTCCGTCGTGCAACCCTGACTATTACAGGTGCCAATCTGGATGCTGGTGTGCCTATCTCATTCCTAACTTTGCCTGATACTCCAGAGACTTACGGCACTGTCGGTCAGATGCTTGTTGTCAATGGTGCTACAAATGGTCTGGAATGGACTGATGTACCTGCTGATGAACTGCCAGCCCTTGGAGCCGCAGGACAAATCCTTGCAGTCAATGGGGCTGCTAATGGTGTGGAATGGATTGATGCTCCCGCAGGTGGTAGTGGGGCTTCTTATGGAACTCCTGACTATGGAAATCCCGGTGGTACAGGAAACCGTACAGGTCTAATCACAGCCTCGACAAACGCTGTTCTGGGTGGTGGTACTACCGTAGATCGCTCTATTGATGGTGCAGTTGGTACAAACTCTGCATCAGCATGGTACTGGAACAGTGGTCAAAACTCTGGTCTTTATGTTCGGTGGGACTTTGGATCCAAACAACGTATTGACCAGATCCGTTGGCAGCAAAACAACACTGCTGGCCATGGTACATGGCGTGTGGAAGGATCTGATGATGCTTCTACGTGGACTCCAGTTTCATCTAACTTCGCTCTGGGTGGTTCTACCGACCAAACCATTGATCTTGATCTGATTCCTGCTGACACTGGATATCGGTACTATCAGATCGCTTGGCAGTCTGGTTCTTCCACCAGCAACAGCCCATGGCTTCAAGAAACTGAATTCCGTCTGGCTCCTGAAAGCAATCCATCAGAACTCCCTGCTGGTGGTACTGCTGGTCAGTTGCTTGCCAAGGTTGATGCTACAGACGGAAACGTCGAATGGATTGATCCTCCTGCTGGTGGTTCTGGTGAACCAAACGTAACAAGCTGGAATGATCTGGCAGCCGGAGTCACTCCGACAAACTGGATCGTAAGCTCTGGTACTCCTGTCACCATGGCTTCCAAAGGTAGCCTCACACCCCGCACAGGGGCTGTCTTCGCAGGTGTGGTGGCTTTTGAAGCCTCTGCTGTGATGTATGAGGATATCACGCTGGAAACTCGTCATCAGGGCATGTACGTCGATCTGACGTACTTCCACGGTCGTGATAACAACGTGAACGACAATGTGAGAGTCGATCTGGCTTTCCTTGATTCTGGAAGCACTCAGATCAGCACAGTCGGAACCACAGATGGCAATGCTGTCGCTGAGAACACATGGGAGCGTGTATCACTCAATGATACATTGATCCCTGACAATGCTGCATTCATTCGAGTGACAGTCACGTTTACCCGTGGCCAAGGCTCTGAACTGAACGCCTATATCGACGACATCAACCTGCGTTTCAAAGCAAATGCTTCGTCTCCTGACGAACTTCCTGCTCTCGGTACACCGGGACAGGTACTTGCTGTGAATGGTGCAGGTGATGGTGTTGAATGGAAAGCTGATGAAACTGGTGCAGAATCTCCTGCAACTGGAGACGGTGTATCTGATTCTTGGACAGTGACATTGGCTACTGCCAACTCGACTTCAGCCTTTGCTCTTAAAGGTAACATCGTCACCATGACTGAAGATCGGTGGCTGACTGCTGTTGATATGGGTCATTCGACCAATAATCTTGGACAGACTGTTGATCTGTTCGTAGCCAAACTGTCTGAAGTCAATCCGGGAACCATCACAGAAATTGTTCTTGATGTCGGTCAGGTTTCTATTTCTGATCCAATTGATGACACACGGTTTACCGTACCTAATGGTGGTCTTCATCTTGAAAACGGTGTGACCTATGTCATTGCATTCGTTCGAACAGATGCAACAGGTGCTGATGCTCTGCAATTGGATTTCCCGTCTGGTGGTACTGAAGCATCCAGCTTCTTTACTCACAATGGTACTGCTCGTGCTGCTTTGAATGCCCCTGCTCTCACAAATACAGTTTATTTCAATAATACTGCTGCTGTGAAAATGGACATTATTACAGAGGGTTACGTTGCACCTGCTTCTCCGGGAGACATGGTTCAGACTGAAATCACAGGTGCAACATACAGCACTCAAGTTTCTGATTTTGCAGGTAATGTCGTCCGTCGAATGAACAGTGCATCGGGTCAGACTGTGACTGTTGAACCAGACATTACAGGACAGCCTGTCACCTTCATCCAAGCTGGTGCAGGTACTGTGACGTTTGCTGCTGGGACTGGAGTCACTATCAACTCTCTGAACAGCAATCTCGCAATTGCAGGACAGTATGGATCTGTTACGCTAATCCCTGATGTGGACACAGCAAACACATTCTATCTGGTAGGTGCCTTGGCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
36b0b85e36e910c2533ac65aed894c807f6b89c6933ff3ec036a7d76d99e0a2d
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,5689
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and Complete Genome Sequences of Three N4-Like Roseobacter Phages Isolated from the South China Sea Li,B., Zhang,S., Long,L. and Huang,S. 2016 27270945 GenBank