Protein

View in Explore
Genbank accession
YP_009814240.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MKSANIGNMAVGTAQIANGAITNAQIGSLAVDTANIKDAAINSAKIANLAVGTAQIGDGAITNAKIGKLAVGTAQIANGAITDAQIGSLAVGTAQIKDEAVNSAKIAKLAVGTAQIGDGAITNAKIGNLAVGTAQIANAAITDAQIGDVSANKLTAGTIDFHTITGKNINASNITTGKLSTERLNVDKLSAVSANLGDVTTGSLKGVDIVAKTFSTPNGSFTTDENGSVVASNLTIRGVTNLVYNAALLGGVGGSNSSIPGWTMGTMGYFSNFTLHDGVPSIGFNGNTGASTWQQLAQSKLYPLNGLTGQPYSASVWFIDAGSDTTMTYNFTLAFFDSSGNRLPSGNYTGVSVSGTGSAQPWKQLTINGFNSPSTAVYVGLQYWAYNGTGHALFSSPMLTQTAQATGYQPDVGNIINAGEINGTIINGSTFHGGSIISNSNNTAHYYPMTITPDGMYNSTYFDNAVGMQSSVESGGISYKYRSMIADGSGQYLSYDSVVNGQGFQSQSGYTSAKDTTFSNSETISGYVNVTPSSGIYLYGPTQQINFAGRRDNIGSNGITMDAYGNVYSQDNSAWWRIGLNNGSKIVDFGIDKAGQNQIYFYRDINMGNISINRAHSITTKDGQALYINSGSGGRADLNVASLTYTGSVSKSLLSEKKDVKKVDTSYWAQLVNSIDLATYQYKDDDNISNLRLSGIVDDVNEDKQWNLPDIFVARDEDGKLAGIENIVLQNAMLATIQEQQKEIDKLNGHLLELEAKLNG
Physico‐chemical
properties
protein length:760 AA
molecular weight: 79581,17420 Da
isoelectric point:5,05619
aromaticity:0,07895
hydropathy:-0,16658

Domains

Domains [InterPro]
G3DSA:2.160.10.20
RBD
1–91
G3DSA:2.160.10.20 DC_0469 IPR030392
DC_1086
STR
28–92
DC_1086 DC_1194
Coil
Unmapped
737–757
Coil
YP_009814240.1
1 760
Architecture
RBD
STR
RBD
STR
RBD 1-27 | STR 28-92 | RBD 129-388 | STR 389-760
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactobacillus phage Iacchus
[NCBI] 		2315483 Uroviricota > Caudoviricetes > Herelleviridae > Harbinvirus iacchus >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009814240.1 [NCBI]
Genbank nucleotide accession
NC_048084.1 [NCBI]
CDS location
range 27699 -> 29981
strand +
CDS
ATGAAAAGTGCAAACATTGGTAATATGGCTGTAGGTACGGCACAGATAGCCAATGGTGCAATTACCAATGCTCAAATCGGTTCATTAGCTGTTGACACTGCCAATATTAAAGACGCCGCTATTAATAGTGCTAAGATTGCTAACCTAGCCGTAGGCACCGCCCAAATAGGTGACGGTGCTATCACTAATGCCAAGATAGGTAAATTAGCTGTAGGCACTGCTCAAATAGCCAATGGTGCTATCACAGATGCTCAGATTGGTTCATTAGCTGTAGGAACAGCTCAGATTAAAGATGAAGCTGTCAATAGTGCTAAAATTGCTAAGCTAGCTGTAGGAACGGCACAAATAGGCGATGGTGCTATCACTAATGCTAAGATTGGTAATCTTGCTGTAGGCACAGCCCAGATAGCCAATGCAGCTATCACTGACGCTCAAATTGGTGATGTTAGCGCCAATAAATTAACAGCTGGCACGATTGACTTTCATACGATTACTGGTAAAAATATTAACGCATCAAACATTACAACAGGAAAACTCAGCACTGAACGGTTAAATGTCGACAAACTATCAGCTGTAAGTGCCAATTTAGGTGACGTTACAACCGGCTCACTTAAAGGTGTTGACATTGTTGCTAAAACGTTTAGTACGCCTAATGGCTCATTTACAACCGATGAAAACGGTAGCGTGGTTGCTAGCAATTTAACAATTAGGGGCGTTACAAATTTAGTTTATAATGCGGCATTGCTAGGTGGAGTTGGTGGTAGCAACTCTAGTATCCCCGGTTGGACAATGGGTACAATGGGATACTTCTCAAACTTTACGTTGCATGACGGTGTCCCTTCAATTGGATTTAATGGCAATACAGGTGCTTCCACTTGGCAACAACTTGCACAGTCTAAGCTTTATCCTTTAAACGGACTAACAGGTCAGCCTTATAGTGCCTCGGTATGGTTTATTGACGCTGGTAGTGATACTACGATGACATATAATTTTACCCTAGCGTTCTTTGATTCAAGTGGCAATAGGTTACCATCTGGGAATTATACCGGCGTTTCAGTATCTGGAACAGGAAGTGCTCAACCATGGAAACAATTGACTATTAATGGGTTTAATTCACCAAGCACAGCTGTCTATGTTGGCCTACAATATTGGGCATACAATGGCACTGGTCATGCTCTGTTTAGCTCACCTATGCTAACACAAACTGCTCAAGCAACTGGTTACCAGCCAGATGTAGGTAATATTATTAATGCCGGAGAAATTAATGGTACCATTATTAATGGTTCAACATTCCATGGTGGTAGCATTATTAGCAATTCCAATAACACCGCTCACTATTACCCAATGACTATTACGCCAGACGGAATGTATAACTCGACATACTTTGATAATGCGGTTGGAATGCAATCAAGCGTTGAGTCTGGGGGAATTAGCTATAAATATCGCTCAATGATTGCCGATGGTAGTGGGCAATATTTATCTTATGATTCAGTAGTTAACGGTCAAGGATTTCAGTCACAATCAGGTTATACGTCAGCTAAAGATACAACTTTTTCAAACTCTGAAACAATCTCGGGATATGTTAACGTAACGCCATCCTCAGGAATCTATCTATATGGGCCAACGCAACAAATAAACTTTGCTGGTAGGCGTGATAATATTGGTAGTAACGGGATTACTATGGATGCTTATGGCAACGTATATTCACAAGATAATTCAGCTTGGTGGCGGATTGGTTTAAATAATGGTTCAAAAATTGTAGACTTTGGGATTGACAAGGCTGGCCAAAATCAAATTTATTTTTACCGTGATATAAATATGGGTAATATTAGTATTAATAGGGCTCATTCTATTACCACGAAAGATGGTCAAGCGCTATATATCAACTCAGGTAGCGGTGGAAGAGCCGACTTAAATGTGGCTAGTCTAACCTACACTGGGTCCGTGTCTAAATCACTATTATCTGAGAAGAAGGACGTTAAAAAGGTTGATACTTCCTATTGGGCACAGCTAGTTAATTCAATCGACCTAGCAACCTACCAGTATAAAGATGATGATAATATCAGCAACCTTAGACTATCAGGGATTGTTGATGATGTTAACGAGGACAAACAATGGAATCTACCAGACATCTTTGTTGCTCGTGACGAGGATGGAAAACTAGCCGGTATTGAGAATATTGTACTTCAAAATGCCATGTTAGCAACTATACAGGAACAACAAAAGGAAATTGATAAGCTAAACGGACATTTATTAGAATTGGAGGCAAAATTAAATGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0dfbe3773c9ea2a42819923aa56b55d232d16704f9513ec682d0970d70709826
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6378
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Lactobacillus phages that infect wine-derived L. plantarum strains Kyrkou,I., Byth Carstens,A., Ellegaard-Jensen,L., Kot,W. and Hestbjerg Hansen,L. 2018-12-03 — GenBank