Protein

View in Explore
Genbank accession
QBX26549.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,91
Protein sequence
MTETIPVRVQHKRMSARDWASSTLVLLDGELGVESDTGKVKVGNGRDRFSALQYLTGPKGDRGETGPVGPKGADGVVRFEGSAAERALEQYAKKSETPTYRIAKGDISGGGVGVNRTITPDAIMNPDGIKVGDIIEDYWSGSSGTNQGFWKVTAVNGTNISVQGIGDRILPTNYNDTELKQRVSALESRPTFDTLTQTQRNSLRGPAGPTGATGPAGPRGADGARGADGAPGQNIINQNGGQALKYWAGTRSQYDAISNKDANTIYDIYR
Physico‐chemical
properties
protein length:270 AA
molecular weight: 28619,28120 Da
isoelectric point:8,68417
aromaticity:0,06296
hydropathy:-0,63519

Domains

Domains [InterPro]
DC_0999
STR
1–267
DC_0999
SSF69349
STR
7–79
SSF69349 G3DSA:1.20.5.320
IPR041352
ATT
9–46
IPR041352 IPR056923
QBX26549.1
1 270
Architecture
ATT
STR
ATT 1-46 | STR 47-269 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan330
[NCBI] 		2548110 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus mitis
[NCBI] 		28037 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX26549.1 [NCBI]
Genbank nucleotide accession
MK448909.1 [NCBI]
CDS location
range 27929 -> 28741
strand +
CDS
ATGACGGAAACAATCCCAGTGAGGGTACAACACAAGCGCATGTCAGCACGAGACTGGGCAAGTAGCACTCTGGTCTTACTCGATGGCGAGTTAGGCGTTGAGAGTGACACAGGTAAGGTCAAGGTCGGAAATGGCCGTGACCGATTTTCAGCCTTGCAGTACCTAACAGGTCCGAAAGGTGACCGTGGAGAAACAGGACCAGTAGGACCAAAAGGTGCAGATGGTGTTGTGCGTTTTGAAGGTTCAGCCGCAGAGCGTGCTTTAGAGCAGTATGCCAAAAAGTCTGAAACGCCAACATATCGCATCGCTAAAGGGGATATTTCCGGAGGCGGTGTAGGTGTTAATAGGACAATAACACCAGACGCTATCATGAACCCTGACGGTATTAAAGTCGGAGATATTATTGAAGATTACTGGAGTGGCTCTAGTGGTACGAACCAAGGTTTTTGGAAAGTAACCGCTGTTAACGGAACTAATATCTCTGTTCAAGGTATTGGTGATAGGATACTGCCAACCAATTACAACGATACCGAACTAAAACAAAGGGTTTCAGCTCTTGAGAGTCGTCCTACATTTGACACGTTGACTCAGACACAACGAAATAGCTTGCGAGGCCCCGCAGGCCCAACAGGGGCAACGGGTCCAGCAGGTCCCAGAGGTGCGGACGGAGCTAGAGGTGCCGACGGTGCGCCTGGACAAAATATCATCAACCAGAATGGTGGGCAAGCGCTGAAATATTGGGCTGGAACAAGGTCTCAATATGACGCAATTTCTAACAAAGATGCTAATACCATCTACGATATTTATCGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
60378cef6048e51620aee1e96086a3c968ec3c44270cab8076fe111362baf595
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7931
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank