Protein

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UniProt accession
A0A8S5UJ13 [UniProt]
Protein name
Spherulation-specific family 4
RBP type
TF
Evidence RBPdetect
Probability 0,82
TF
Evidence RBPdetect2
Probability 0,86
Protein sequence
MAAPYCTLTGTIPGGENGRALVRIVPDVKGATATVEGAAVSMREHMVRTDQAGAVNIEVLAPGAGVTPSGAWTHTIYIDSPKFDIVKHVALTQGGTIDVMSADPTSEISPLPFGGGGGGGGVGAPGPRGPQGPTGPKGDPGPAGPPGPKGDAGERGPEGPRGLQGPPGPAGGGAGGTPVPGPEGPRGPVGPPGPKGDNGLPGPTGPAGPAGANGQPGPKGDPGPAGPPGPQGPPGPAGERGPAGQDAVTPQLDKYLTKDEAAKTYGEKADVEDALRQTNPFKNGARYYSPVTYYWPDYYQDGKPGQFSKWAQTLKFRDNLGYVILNRNSGDWEAQEVDFQKQGELALGAGAKKVLFYIKTQYGAAINPDDEANRGIPNAAKFTKEYILEQLKRAKHWYGDLVQGVFLDEVINGWDARKDRLPWYKDLIDTIRRENGLDFVIAINTGSNISQEVCNLDFDVCMMFEGTATKFLQEDPTSPILPDHMKAYPSTRWWAVVHSVTSENYQKVFDKADNLAISHLYVTDGFLVEDPQNGGQWHPIGNPYENPPGAEIRELIIPWLKGYLKLKLKVDNLKIPEVPKMIVLGPDDPVPAGTLSGTVIVRRAK
Physico‐chemical
properties
protein length:605 AA
molecular weight: 63892,06310 Da
isoelectric point:5,47714
aromaticity:0,07769
hydropathy:-0,50380

Domains

Domains [InterPro]
DC_1765
ATT
1–116
DC_1765 IPR050149 DC_1732 IPR021986 DC_1244
G3DSA:1.20.5.320
STR
214–265
G3DSA:1.20.5.320 IPR021986
A0A8S5UJ13
1 605
Architecture
ATT
STR
RBD
ATT 1-116 | STR 214-321 | RBD 322-605
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Siphoviridae sp. ctYlL44
[NCBI] 		2825552 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAF94394.1 [NCBI]
Genbank nucleotide accession
BK016091 [NCBI]
CDS location
range 22339 -> 24156
strand -
CDS
ATGGCAGCGCCATACTGTACTTTAACGGGAACTATTCCCGGAGGAGAGAATGGTCGGGCTCTTGTCCGAATCGTTCCTGACGTGAAGGGGGCTACGGCTACCGTTGAAGGTGCCGCAGTCTCGATGCGCGAGCACATGGTTCGGACAGACCAGGCTGGCGCTGTCAACATCGAGGTACTGGCTCCGGGCGCTGGAGTAACCCCCTCTGGCGCCTGGACCCACACCATATACATCGATTCCCCCAAGTTTGACATCGTCAAGCATGTTGCTCTGACTCAGGGTGGAACTATTGACGTAATGTCCGCTGACCCCACATCCGAGATCTCCCCCCTTCCATTCGGAGGCGGAGGTGGTGGCGGTGGAGTTGGCGCACCTGGTCCTCGTGGACCACAGGGACCAACCGGACCCAAGGGTGACCCAGGTCCTGCTGGCCCTCCCGGACCTAAGGGCGATGCTGGTGAACGCGGACCAGAAGGCCCTCGAGGTCTTCAGGGTCCTCCTGGACCCGCTGGTGGCGGAGCTGGAGGAACCCCGGTACCTGGCCCCGAAGGACCTAGGGGTCCTGTCGGCCCTCCTGGACCTAAAGGCGACAATGGTCTTCCGGGCCCTACCGGACCTGCTGGTCCCGCCGGGGCAAATGGTCAACCCGGACCCAAGGGTGACCCAGGTCCTGCTGGCCCTCCTGGACCTCAGGGTCCTCCCGGACCTGCTGGAGAGCGTGGCCCGGCCGGTCAGGATGCAGTCACCCCTCAGCTCGACAAGTATCTCACCAAGGATGAGGCGGCAAAGACCTACGGCGAGAAGGCTGATGTCGAGGACGCACTCCGACAGACCAACCCATTCAAGAACGGAGCTCGGTACTACTCTCCAGTAACCTACTACTGGCCTGACTACTATCAGGACGGAAAGCCCGGGCAGTTCTCCAAGTGGGCTCAGACGCTGAAGTTCCGGGATAACCTCGGATACGTCATCCTTAACCGCAACAGCGGAGACTGGGAGGCACAGGAGGTAGACTTCCAGAAGCAGGGTGAGCTCGCTCTCGGCGCTGGTGCTAAGAAGGTCCTGTTCTATATCAAGACCCAGTACGGAGCGGCTATCAATCCCGACGATGAGGCTAACCGAGGCATTCCCAATGCGGCTAAGTTTACCAAGGAGTACATCCTTGAGCAGCTGAAGCGGGCTAAGCATTGGTATGGCGACCTAGTGCAGGGCGTCTTCCTAGACGAGGTCATCAACGGCTGGGATGCTAGGAAGGATCGTCTTCCGTGGTATAAGGATCTGATCGATACAATCCGCCGCGAGAACGGACTGGACTTCGTGATCGCCATTAACACCGGATCCAACATCTCTCAGGAAGTGTGCAACCTCGACTTCGACGTCTGTATGATGTTCGAAGGAACGGCGACCAAGTTCCTCCAGGAGGATCCGACTTCGCCGATTCTTCCGGACCACATGAAGGCTTATCCGTCCACTCGATGGTGGGCAGTGGTGCACTCCGTCACTTCGGAGAACTACCAGAAGGTCTTCGATAAGGCCGACAACCTCGCGATCAGCCATCTCTACGTCACCGACGGCTTCCTTGTTGAGGATCCTCAAAATGGTGGTCAGTGGCACCCAATTGGAAACCCTTACGAGAACCCTCCGGGCGCCGAGATCCGGGAGCTGATCATTCCGTGGCTCAAGGGGTACCTGAAGCTCAAGCTGAAGGTCGACAATCTCAAGATTCCCGAGGTTCCGAAGATGATTGTCCTCGGACCTGATGATCCGGTGCCTGCCGGGACTCTGTCCGGGACGGTGATTGTTAGGCGGGCCAAGTAA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0031012 extracellular matrix Cellular Component IEA:TreeGrafter (UniProt)
GO:0005615 extracellular space Cellular Component IEA:TreeGrafter (UniProt)
GO:0030020 extracellular matrix structural constituent conferring tensile strength Molecular Function IEA:TreeGrafter (UniProt)
GO:0030198 extracellular matrix organization Biological Process IEA:TreeGrafter (UniProt)

Tertiary structure

PDB ID
7b0d1aa82d0192b4a31caf62a560b1a25c82f923e29c9162b2999fd28a798144
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7387
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50