Protein

View in Explore
Genbank accession
XAQ48623.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,50
Protein sequence
MATIVVPQRFAQRRDTSANWNSKDPVLWNGEIGFLLDPGQAVKLKVGDGTKKWSELDFFASDGKPVQLRAADGYIQWNYVGDTSWINLVSLDNLRGADGDDGADGKSAYEIAVDGGFVGTIPDWLASLKGEPGDKGDKGDPGNPGTPYARRIQHVADTDAGTFECDWGQYDEIRISLTATVVLSFTGAIDGQGCVLKLRQPPAGGCQVGLPSGVVRFNSLIQAYAVTQAGSRADKVGFVYDGEDARYDLVSIVPGI
Physico‐chemical
properties
protein length:256 AA
molecular weight: 27361,15350 Da
isoelectric point:4,59165
aromaticity:0,09375
hydropathy:-0,26719

Domains

Domains [InterPro]
DC_1473
STR
1–255
DC_1473
SSF69349
STR
9–131
SSF69349
IPR041352
ATT
13–50
IPR041352
XAQ48623.1
1 256
Architecture
STR
ATT
STR
STR 1-12 | ATT 13-50 | STR 51-255 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage vB_XeuM-YB23
[NCBI] 		3144279 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Xanthomonas euvesicatoria
[NCBI] 		456327 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XAQ48623.1 [NCBI]
Genbank nucleotide accession
PP756300 [NCBI]
CDS location
range 40472 -> 41242
strand +
CDS
ATGGCAACCATCGTAGTACCCCAGCGATTTGCCCAGCGCCGTGACACGTCGGCGAACTGGAACAGCAAGGACCCGGTCCTCTGGAACGGCGAGATCGGCTTCCTGCTGGACCCCGGCCAGGCCGTCAAGCTGAAGGTCGGCGACGGCACCAAGAAGTGGAGCGAGCTCGACTTCTTCGCCTCCGACGGCAAGCCGGTGCAGCTGCGGGCGGCCGACGGGTACATCCAGTGGAACTACGTCGGGGACACGTCCTGGATCAACCTGGTCTCCCTGGACAACCTGCGCGGCGCGGACGGCGACGACGGGGCCGACGGCAAGAGCGCCTACGAGATCGCCGTCGACGGCGGCTTCGTCGGCACGATCCCGGACTGGCTGGCCTCGCTGAAGGGCGAGCCCGGCGACAAGGGCGACAAGGGCGACCCCGGCAACCCCGGCACGCCGTACGCCCGCCGCATCCAGCACGTGGCCGACACCGACGCAGGCACCTTCGAGTGCGACTGGGGCCAGTACGACGAGATCCGGATCTCCCTCACGGCCACGGTGGTGCTGAGCTTCACCGGGGCCATCGACGGCCAGGGCTGCGTCTTGAAGCTGCGCCAGCCGCCGGCGGGAGGGTGCCAGGTCGGGCTGCCCTCCGGCGTGGTCCGGTTCAACTCCCTGATCCAGGCGTACGCCGTTACCCAGGCCGGGTCGCGCGCGGACAAGGTTGGTTTCGTCTACGACGGTGAAGACGCACGATACGACCTGGTCTCCATCGTTCCCGGGATATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
665dc0d033651cccd352b47069a156aae23590e036ac44aa4fc826cb1fbe0d38
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8973
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
complete genome sequence of Xanthomonas phage vB_XeuM-YB23 Kim,Y.B., Park,E.J. and Kim,J.H. 2021-01-07 — GenBank