Protein

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Genbank accession
XAG97660.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 0,98
Protein sequence
MATSGEKYTAFARHRLNCRWSINRQDIAGNYTIVTGFLYLQSMDAYGAISASAVGQAQVTINGQKQTENATSQLSAHQNKLLLAKDYRVGHNNDGSKTTTVSGSYFVNVTFAGVYYGTISVGNFNADLPKIPRHSSLNPVPTFTVPNGCSFSISRQSNFTHGLSFWVQNRANPTLSDDSHWTWLADVSNVATSGKFNFTDGQLSTIAQRIKQFAGNGGNILGKVKLWTNGVSGLSQQRTVQIAHPAPASPNIKDFSLTSGEKINIGLDSFQSDSKFKYDVTFRCAGWSKSWSNLTTSSTGWTLTQEDVNNMLSRFTGATKNGYEVEIVSKLCGSQYRNSIKKYASAIVNTETASPLITEGFSHEDTNQVSIAITGNKKVLLDKNSTLRVTVPSSIITTRDYGKPASVEASFAGIKKTVNYAEGNMVLDFGVITGTTGNLTVTAIDSRGLKGSASYEVTVLPYNMPVINFNVRRNNSFETDTLVSGTSIWSPVDGKNKILSVQYQISGSDKVDIPFTTAANVLSITAQTLPLDNSQSWTVTIFITDKTGTYSRSYNITEGKPLMFIDPNRKSVSFGDFPTTGEERGLPGVIEIEADRYHDSGKTGIQMNNSDISGLNGLFFSNDSMNNTGEGLNFIKSGKEINSPNHDDYDHIYMRDGSLYINNDSVPLFTMNAEKSGFLEKRLWSGAWYIGNTQKTVISKSIYACPNGWALFFSRYSGGAPSDVDSVCVLLHKATLQSTGTNHKRVLISTYSDTIAVKAFHIQDNGTSIVGSNNNNSVGENAKTVLRAVYEW
Physico‐chemical
properties
protein length:792 AA
molecular weight: 86363,26300 Da
isoelectric point:8,66553
aromaticity:0,09722
hydropathy:-0,32917

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XAG97660.1
1 792
Domain Start End Length (AA) Confidence
N-terminal 1 111 111 0,0006
Central domain 112 386 276 0,8411
C-terminal 387 792 405 0,4676
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-111
Central
112-386
C-terminal
387-792

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterococcus phage VRE9_4
[NCBI] 		3141818 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Enterococcus faecium
[NCBI] 		1352 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XAG97660.1 [NCBI]
Genbank nucleotide accession
PP680570 [NCBI]
CDS location
range 35772 -> 38150
strand +
CDS
ATGGCAACAAGTGGAGAGAAATATACTGCTTTTGCTCGACATCGTTTAAATTGTAGATGGTCGATAAACCGACAAGATATTGCTGGTAACTACACAATTGTCACCGGTTTTTTATATTTACAATCTATGGACGCCTATGGGGCTATTTCAGCTTCTGCCGTAGGTCAAGCACAAGTTACAATTAATGGACAAAAACAAACTGAAAACGCAACTTCTCAATTAAGTGCGCATCAAAATAAATTATTATTAGCTAAAGATTATCGAGTAGGACATAATAATGACGGTTCAAAAACGACTACTGTTTCTGGAAGTTATTTTGTAAATGTTACATTCGCAGGAGTTTATTATGGAACGATATCTGTTGGGAATTTTAACGCAGATTTACCCAAAATTCCTAGACATAGTTCATTGAATCCAGTACCAACATTTACAGTTCCTAATGGATGCTCTTTTTCTATTAGCAGACAATCAAATTTTACACATGGACTAAGCTTTTGGGTCCAAAATAGAGCTAACCCTACGCTATCTGATGATAGTCATTGGACGTGGCTTGCAGATGTAAGCAATGTCGCAACGAGTGGCAAATTTAATTTTACAGATGGACAGCTATCAACTATTGCTCAAAGAATAAAACAATTTGCTGGTAATGGTGGAAATATTTTGGGAAAGGTTAAACTATGGACGAACGGCGTGTCCGGCCTTAGTCAACAACGAACAGTCCAGATTGCTCATCCAGCACCAGCTTCTCCTAATATTAAAGATTTTTCTTTAACCTCAGGAGAAAAAATTAACATTGGACTAGATAGTTTTCAATCGGATAGTAAATTTAAATATGATGTAACATTTAGGTGTGCTGGCTGGAGTAAATCATGGTCTAATTTAACAACAAGCTCTACAGGATGGACGTTAACCCAAGAAGACGTAAATAATATGTTGAGTAGATTTACTGGAGCAACAAAAAATGGTTACGAAGTAGAAATTGTTTCTAAACTTTGTGGTTCACAATATAGGAATAGTATAAAAAAATATGCAAGTGCGATTGTTAATACGGAAACAGCTTCACCCTTGATAACTGAAGGTTTTTCTCATGAAGATACAAATCAAGTATCCATTGCTATAACAGGAAATAAAAAAGTACTTTTAGATAAAAATTCTACTTTGAGAGTAACGGTTCCTAGTTCAATAATAACAACTAGAGATTATGGTAAACCAGCTAGTGTTGAGGCATCATTTGCAGGGATCAAAAAAACGGTTAATTATGCAGAAGGAAATATGGTTTTAGACTTTGGTGTTATTACAGGAACAACAGGAAATCTAACTGTAACAGCTATTGACAGCCGAGGATTAAAAGGGAGCGCTTCTTATGAAGTTACGGTACTTCCATATAATATGCCTGTGATTAACTTTAATGTAAGAAGAAATAATAGCTTTGAGACAGATACTTTAGTTTCAGGTACTTCTATCTGGTCTCCTGTTGATGGAAAAAATAAAATTTTGTCTGTACAATACCAAATAAGTGGTTCAGATAAGGTAGATATTCCTTTTACGACAGCAGCAAATGTTTTAAGTATTACAGCCCAAACATTGCCGCTAGATAATTCTCAATCTTGGACAGTTACAATATTCATTACAGATAAAACTGGAACATATTCTAGATCATATAATATTACGGAAGGTAAACCATTAATGTTTATCGATCCAAACCGTAAATCTGTTTCTTTTGGGGACTTCCCAACAACTGGTGAAGAAAGAGGATTGCCTGGTGTTATAGAAATAGAAGCAGATAGATATCATGATAGCGGCAAAACAGGTATTCAAATGAATAATAGTGATATTTCTGGTTTAAATGGACTATTTTTTTCTAATGATTCAATGAATAATACTGGAGAAGGACTTAATTTCATCAAATCTGGAAAAGAGATTAATTCGCCTAATCATGATGATTATGACCATATTTATATGAGAGATGGCTCTCTTTACATTAATAATGATAGCGTTCCGCTTTTTACTATGAACGCTGAAAAATCTGGATTTTTAGAAAAAAGATTATGGTCTGGAGCTTGGTATATTGGTAATACCCAAAAAACAGTTATATCTAAGAGTATTTATGCTTGCCCTAATGGTTGGGCATTATTTTTCTCTAGATATTCTGGTGGGGCTCCATCTGATGTGGACTCTGTGTGCGTACTTCTTCATAAAGCTACACTACAATCAACGGGTACTAATCATAAACGTGTACTAATTTCAACGTATTCTGACACAATAGCAGTTAAAGCCTTTCATATTCAAGACAATGGAACATCAATTGTAGGCTCTAACAATAATAATTCTGTAGGAGAAAATGCTAAAACAGTACTAAGGGCGGTGTACGAATGGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
34e6246f523bfb6d73fc5cfe11ea3edd37f3c16abe00465c33a7d6687df7503e
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2804
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophage library of National Institute of Infectious Disease Japan Azam,A.H., Ojima,S. and Kiga,K. 2022-12-05 — GenBank