Protein

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Genbank accession
YP_010662137.1 [GenBank]
Protein name
tail fiber protein host specificity
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MPIWTNVAGTWKKVLDPEIKKAGAWTPVKVVSVKVGGVWQQVFAIEVVAFVAANTTNVSMQSLFSAGDWTNPLLKKRVVVNPGVIVGSTNPAVSALRTGTGWAGQLQLDNYGEIQGAGGAPNSGAGGHAIQCQAAGLTIKNFGAIRGGGGAGGKGGNGGAGVYYTTVTEGPLFTGYPSGGTRNYWQTSPGSSDSVWWSNTNYNFGDINSPYTTGGITWTRGTQRASSSSGGFTTTYFDVYRSYQQANGTSGGAGGNGGRGKGYGQTNAAGSSGSAGGTNAGTGGTGGTGGDWASGGATGATGNSGNNGGGSAGTAGGAAGKAISGSNTLINTGVVNGATS
Physico‐chemical
properties
protein length:340 AA
molecular weight: 33423,00950 Da
isoelectric point:9,65409
aromaticity:0,08824
hydropathy:-0,26088

Domains

Domains [InterPro]
DC_1762
ATT
1–180
DC_1762 DC_0422
IPR007932
RBD
49–193
IPR007932
YP_010662137.1
1 340
Architecture
ATT
RBD
ATT 1-180 | RBD 181-340
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage P9VFCI
[NCBI] 		2763531 Uroviricota > Caudoviricetes > Pootjesviridae > Innesvirus P9VFCI >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010662137.1 [NCBI]
Genbank nucleotide accession
NC_070886.1 [NCBI]
CDS location
range 149024 -> 150046
strand +
CDS
ATGCCGATTTGGACAAACGTCGCTGGAACTTGGAAGAAAGTTCTCGATCCAGAAATCAAGAAGGCTGGAGCATGGACTCCAGTCAAGGTAGTTTCTGTCAAGGTAGGAGGCGTCTGGCAACAGGTCTTCGCTATCGAGGTCGTGGCATTCGTAGCTGCGAATACGACCAACGTTTCCATGCAGTCTCTGTTCTCAGCAGGAGACTGGACGAACCCTCTTCTCAAAAAGAGAGTCGTTGTCAATCCTGGTGTGATTGTCGGCAGCACGAATCCTGCGGTCTCTGCTCTTCGTACTGGTACAGGCTGGGCTGGTCAGCTTCAGCTCGACAACTATGGTGAAATTCAAGGCGCTGGTGGTGCTCCTAACTCCGGCGCTGGTGGACATGCTATTCAGTGTCAAGCTGCTGGACTCACTATCAAGAACTTCGGTGCTATTCGAGGCGGCGGCGGTGCTGGAGGCAAAGGTGGTAACGGTGGTGCTGGTGTCTACTACACGACTGTTACAGAAGGTCCATTATTCACAGGCTATCCCTCTGGCGGAACTCGAAACTATTGGCAGACTTCTCCTGGTTCTAGTGACTCAGTCTGGTGGAGCAACACTAACTACAATTTCGGCGACATCAACAGTCCTTATACGACAGGTGGAATCACTTGGACACGCGGAACTCAAAGAGCAAGTTCGTCCAGCGGAGGCTTCACCACTACTTACTTCGACGTGTATCGATCCTACCAACAAGCCAACGGTACCTCTGGTGGTGCTGGTGGTAACGGCGGTCGAGGCAAAGGTTACGGACAGACGAATGCTGCTGGTTCTTCTGGATCTGCTGGTGGTACGAACGCTGGTACTGGTGGTACAGGCGGCACCGGTGGAGATTGGGCTTCCGGAGGTGCAACAGGTGCAACAGGCAATTCCGGCAACAACGGTGGTGGATCCGCTGGTACTGCTGGCGGAGCAGCTGGTAAAGCTATCTCTGGCTCGAACACTCTGATCAATACAGGTGTAGTCAACGGAGCGACTTCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
50af6924c1133139ad054a15e44a8f52acb95569c46234356dd1040f65c397b2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8541
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Rhizobium leguminosarum bacteriophage vB_RlegM_P9VFCI Gunathilake,D., Bhat,S., Yost,C.K. and Hynes,M.F. 2020-03-12 — GenBank