Protein

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UniProt accession
A0A8S5PCZ1 [UniProt]
Protein name
Pulmonary surfactant-associated protein D
RBP type
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MAKFLLGNLKGPKGDRGEAGPRGPQGIQGPPGTAENIDLTPFVKKTEGATLTGQYTFTNNTPIKLNGYNIVSENNRILFKNADNNNVFAFDVNTITHNDKSLLTQDKANTLYAPIGDYALRTALNSYATKDELTSYASKQFVTYGLKSYLTKTDADTTYAKKTDIGNSLTLTQANDAYISKAGTNNVTGTINISQTAGLALANHILESNPTNLVIKNKANQPILTVYPSVAYLNGREVLNQFKADQIYVKKDQYNNDMNSLLTALRNVNN
Physico‐chemical
properties
protein length:270 AA
molecular weight: 29442,59950 Da
isoelectric point:9,11088
aromaticity:0,08148
hydropathy:-0,49593

Domains

Domains [InterPro]
DC_1165
STR
5–250
DC_1165
G3DSA:1.20.5.320
STR
9–61
G3DSA:1.20.5.320
A0A8S5PCZ1
1 270
Architecture
STR
STR 5-250 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Myoviridae sp. ctFPV8
[NCBI] 		2825068 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAE04315.1 [NCBI]
Genbank nucleotide accession
BK015385 [NCBI]
CDS location
range 30682 -> 31494
strand +
CDS
ATGGCTAAATTTTTACTAGGCAATTTAAAAGGTCCTAAAGGCGACCGTGGCGAAGCCGGTCCTCGTGGTCCACAAGGTATTCAAGGACCTCCTGGCACTGCTGAAAATATTGACTTAACTCCTTTCGTTAAAAAAACAGAAGGTGCTACATTAACTGGTCAGTATACGTTTACCAATAATACGCCTATTAAATTAAATGGCTATAATATCGTATCTGAAAATAATCGTATTTTATTTAAAAATGCAGATAATAATAATGTATTTGCTTTCGATGTTAATACCATCACACATAACGATAAATCTTTATTGACACAAGATAAAGCTAATACGTTATATGCTCCTATCGGTGACTATGCATTAAGAACAGCACTTAATTCGTATGCTACTAAGGATGAGTTAACTAGTTATGCAAGTAAGCAATTCGTTACCTACGGATTAAAAAGTTATCTAACTAAAACCGATGCCGATACTACATATGCTAAAAAAACCGATATCGGCAATTCTTTAACGCTTACACAAGCTAACGATGCTTACATATCTAAAGCTGGTACTAATAACGTAACCGGTACGATTAATATTAGCCAGACTGCCGGTCTTGCCTTAGCTAACCATATCTTAGAGTCTAACCCGACCAACCTCGTTATTAAGAATAAAGCTAACCAACCTATACTTACGGTATATCCTTCCGTAGCCTATCTTAATGGTCGTGAAGTCCTTAACCAATTTAAGGCCGATCAGATATACGTTAAGAAAGATCAATATAATAACGATATGAATTCACTCTTAACAGCATTAAGAAACGTTAATAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a264db810aabdf6a96aaaec52aa4aa03b47c3de65a94e0d75132069121b151aa
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,5444
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50