Protein

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Genbank accession
URG18185.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSSGCGDVLSLADLQTAKKHQIFEAEVITGKSGGVAGGANIDYATNQVTGQAQKTLPAVIADANADFDAQILNMGFTRVGTFAAGATLTNPRQTLLWDVADGGDGQEYGWSGAFPKVVPAASTPASGAWISRFDPELRIAVREVLRRSYAETGYNLVAGSFEAGGTVTTATDVLLYESKGKAYSYSGTLPHTVAAGSTPSAEPEVWLDRSDELNAVKQVGAVSIATINTSIAGMADGELTIPPGEYAINGDVIIQLKNNESTTGPFGSFRLNAEGVRFTGSGNIIVDSCKRLTIVGIDAPNHNLILRGCWWSNFEGMRFKYLMLADVAGTAFTSNYWCQWTNCQFQSIKTGAASTFNNKFDWYSCSMRGNANQGFSGPADYAFEFNANANAQAWVFWGGDISYHNIAVYNVGAGNTNGDIELTFDGTYFDTLTPAPINRARSRVQTKKCHYSNSTTSLPNSAKMQAVARGGQDMFRQDRSAGWAQFSAINFIPDGDFRVGLPTYAGAGRPIGASGGAVITEASGAISGRYLNINQAGTSGTTRFRPVPLPFTGRYTAAIIIRNADPGARTIRLGFNNLYEVAEISNTDWTFWTLTVGADIAAGQQPDIQILTNDATPFNVDVCYAAVTFGEGGQPMVAAPAVSELLGSVSYNPPSMATGTGASTTITVNGAELGDFAIPSFGIDLQGIQMWAQVTSANTVTVFFRNETGATIDSLSSTLRVRVVKATYV
Physico‐chemical
properties
protein length:729 AA
molecular weight: 77339,34130 Da
isoelectric point:5,04289
aromaticity:0,10151
hydropathy:-0,08477

Domains

Domains [InterPro]
DC_1596
STR
1–143
DC_1596 G3DSA:2.10.10.80
G3DSA:2.10.10.80
ATT
76–142
G3DSA:2.10.10.80
IPR040775
RBD
80–130
IPR040775
DC_0706
STR
117–729
DC_0706
URG18185.1
1 729
Architecture
STR
ATT
STR
ATT
STR
STR 1-75 | ATT 76-142 | STR 143-152 | ATT 153-221 | STR 222-729
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
URG18185.1
1 729
Domain Start End Length (AA) Confidence
N-terminal 1 223 223 0,9960
Central domain 224 489 267 0,9888
C-terminal 490 729 239 0,9286
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-223
Central
224-489
C-terminal
490-729

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage SZH-1
[NCBI] 		2945916 No lineage information
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
URG18185.1 [NCBI]
Genbank nucleotide accession
ON391668.1 [NCBI]
CDS location
range 20088 -> 22277
strand -
CDS
ATGTCAAGCGGATGCGGTGACGTTTTAAGCCTGGCGGATTTACAGACCGCCAAGAAACACCAGATTTTCGAAGCTGAGGTTATCACCGGTAAATCCGGCGGCGTTGCTGGTGGCGCTAATATTGATTACGCGACAAATCAGGTTACCGGACAGGCACAAAAGACGCTACCGGCTGTTATTGCGGACGCCAACGCGGATTTCGACGCCCAGATTCTGAACATGGGGTTTACTCGCGTCGGAACCTTTGCAGCAGGCGCAACACTTACCAATCCGCGCCAGACTCTGCTGTGGGACGTTGCCGATGGGGGCGACGGCCAGGAATACGGATGGAGCGGCGCGTTCCCGAAAGTCGTACCCGCGGCCAGCACCCCGGCATCTGGAGCTTGGATTAGCCGATTCGACCCTGAATTACGCATTGCTGTGCGCGAAGTCTTGCGCCGCTCCTACGCCGAGACTGGATATAATCTGGTTGCTGGCAGCTTCGAGGCTGGTGGCACGGTAACGACCGCCACCGATGTGCTGCTATATGAATCGAAAGGCAAAGCCTACTCCTACTCCGGCACTCTGCCGCACACTGTTGCGGCTGGCTCCACCCCCAGCGCAGAGCCGGAGGTGTGGCTTGATAGGAGCGATGAGTTAAACGCCGTCAAACAAGTTGGGGCTGTATCTATCGCAACAATTAACACTTCCATCGCTGGAATGGCGGATGGCGAGCTAACAATACCCCCCGGTGAATACGCAATCAACGGCGATGTGATAATCCAGTTGAAGAACAACGAAAGCACTACCGGGCCTTTTGGGTCGTTTCGCTTAAATGCCGAAGGGGTCCGGTTTACAGGTAGCGGAAATATTATTGTCGATAGCTGCAAGAGACTGACTATTGTCGGTATCGATGCGCCAAATCACAATCTTATTTTGCGCGGTTGCTGGTGGAGCAACTTCGAAGGGATGCGATTTAAATACCTAATGCTCGCTGATGTGGCGGGAACTGCATTTACAAGCAACTACTGGTGTCAGTGGACAAACTGCCAATTCCAATCCATTAAAACTGGCGCGGCTTCAACGTTCAATAATAAGTTTGATTGGTATTCATGCTCAATGCGGGGTAACGCAAACCAAGGTTTTTCTGGCCCAGCAGACTATGCATTCGAGTTCAACGCTAACGCAAACGCACAAGCATGGGTTTTCTGGGGAGGGGATATTAGTTATCACAATATTGCTGTTTACAATGTTGGCGCTGGAAACACAAATGGAGACATTGAGTTGACGTTCGACGGGACGTATTTCGACACGCTGACCCCCGCTCCAATCAATCGCGCTAGAAGCAGAGTTCAAACAAAGAAGTGTCACTACTCAAACAGTACAACAAGCCTTCCGAACTCTGCAAAAATGCAGGCTGTTGCTCGCGGCGGGCAGGATATGTTTCGCCAAGACCGCTCCGCCGGTTGGGCGCAATTCTCAGCCATCAACTTCATCCCTGATGGGGATTTCCGCGTAGGTCTTCCGACTTATGCCGGAGCTGGACGTCCTATCGGAGCATCTGGTGGCGCGGTGATCACCGAAGCGTCCGGTGCAATATCCGGCAGATATCTGAACATCAATCAAGCTGGAACAAGTGGCACCACTCGATTTAGGCCGGTGCCGCTCCCGTTCACAGGCAGATACACCGCAGCAATAATCATCCGCAATGCCGACCCTGGAGCTAGAACAATCCGCCTTGGTTTTAACAATCTTTACGAAGTCGCAGAGATTAGCAACACGGACTGGACTTTCTGGACTCTGACGGTGGGTGCAGACATTGCAGCAGGGCAGCAGCCAGACATCCAAATCCTGACAAATGACGCAACCCCGTTCAACGTTGATGTTTGCTATGCCGCAGTAACATTTGGTGAGGGTGGGCAGCCCATGGTGGCTGCCCCAGCAGTTAGTGAGCTACTTGGGTCTGTGTCGTACAATCCGCCGAGTATGGCGACTGGGACGGGTGCTAGCACGACAATTACAGTAAACGGTGCGGAGCTTGGTGATTTCGCTATCCCCAGTTTCGGGATAGACCTGCAAGGCATTCAAATGTGGGCTCAGGTAACCAGCGCAAATACCGTTACTGTGTTTTTCAGAAATGAAACAGGGGCGACGATAGATTCGTTGTCATCAACATTGCGAGTACGTGTAGTGAAGGCCACGTATGTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
cfc590d13e7b3b2efb383b5f56aaedb9abf76f69f1caa9a11b038f36cbee08f3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7638
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50