Protein

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Genbank accession
XYM58675.1 [GenBank]
Protein name
virion structural protein
RBP type
TF
Evidence RBPdetect2
Probability 0,89
Protein sequence
MPAINVAKTDTFEIQRQKINTIAENVFAFAAGGSDLATGNLKLGDGAKDEPSLAFTSDLQLGLYKSAQNTATFVSATKRIFEYNNVGSIYYRDFIIRKATLFNEGIEIQADGQNYDVGSYQDISAFGGTGESGSFNITVSEYAGTTTSGSNYVFSGAEGDDQYSNITLLGGSGNNDNVVSITFAGGGFSETTIQQYGTGYQVGDVLTLPTSQTGVTGTATEDQNTVAVSSVTGIVEGMVFTQTGGTAVFATPTDIDDNPTDILVTGVDGENNEIQLNTTATTAGTATFTLTVPWGDAGSGYQYTITKVGVITQVSVNNPGNGYADDDVLTVNPLDLTAFIDYTVTTIDGQVINFSPAISGSAFSVGQTVSTVDPSDSEAIPASGEVLEVTTSGGSITSILVAFEEGSSDAGYNITGNGTYTVDSVDNAARYQIDTTEDQSNPQLYPQLTLYKDNKYRFDVSNIGSHPFRFSVHQDGIHAGFTETLTLSDSSTTITVSDSTGLFVGMSVTTNNSADETGELAGDTTITEIDGNNINLSAAPIASGSAVVVFAGVLYEGAEVSYADDYVIITPTDSTPATLYYYCNVHPNMGGTGSLTINYNNPKTFGTGFEVLAFEVEEVDVITGTVASGDFNVASITGTGVNVETITTTDITGDEGEFTRTVTPELALEVNADKTTLTSITALGGEIILTGTSLSLGDNFTVNGDTGTLNTNGILKTTNKLNINDVLNIVDDTISATTNNSIFIVPAAGKITKIDSTTALVIPKGDTSGRPLTGQVQDGAIRFNTETNQYEGYSETTSSWSSLGGVRDLDGNTYIDAEAFPGANDNTLYFYNDNVNTLQVTRNFLDFRNTKKIRSANTTAPTYTEWFANIPVTVTTPTTKLKYRNNIYEVVGAGVTATSGNEPNDTSGDPFVNGTATLQWIATAVDALTFQEISEVRIDPFGDTPLVVSGELRFLGNVISTDINDLIIRPNSGKKVSIDAASSLKIPVGDNNQRGAAVTGSIRFNTDILQYEGYDGNNWSSLGGVRDVDGNTYIIPETAPGENENTLFFYNNGVNTVRVTENEFIFDGIEDVFSSTTDNLNVNIESLTFENGALVLEHSDITQTYLYTTREHFDIGMSQGLTIDKFLRLSDTGDIKYNVNFPNGGGVPDFLTMVSGDLKTVEFADVRIKSAVATLVKGTNDVFGTEIYTTTDKGARVLITIENTTLNQKEQVELSVIDNGTDIVYTDYGNIKTGIDLFTASFDYNALNNVRVNVTLHPDLNLGNSCNVTITSYVNK
Physico‐chemical
properties
protein length:1276 AA
molecular weight: 135705,90290 Da
isoelectric point:4,07367
aromaticity:0,08699
hydropathy:-0,16403

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage Sf-FR1
[NCBI] 		3413218 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYM58675.1 [NCBI]
Genbank nucleotide accession
PV340855 [NCBI]
CDS location
range 83563 -> 87393
strand +
CDS
ATGCCAGCAATTAATGTAGCAAAAACAGATACCTTTGAAATTCAAAGGCAAAAAATCAATACGATAGCAGAGAACGTCTTCGCATTTGCTGCTGGTGGTAGTGATCTCGCCACAGGAAATCTGAAGTTGGGCGATGGTGCAAAGGATGAACCGTCTCTAGCATTTACTTCTGACCTACAACTAGGTTTATATAAATCAGCACAAAATACTGCAACATTTGTTAGTGCTACTAAAAGAATTTTTGAATACAATAACGTAGGTTCAATTTATTATAGAGACTTCATTATCAGGAAGGCAACTCTGTTCAATGAAGGTATTGAGATTCAAGCAGATGGTCAAAACTATGACGTAGGTAGTTATCAAGATATCTCTGCTTTCGGTGGTACTGGTGAAAGTGGTTCGTTTAATATCACTGTTTCTGAATATGCTGGTACTACTACTTCGGGTAGCAACTATGTATTCAGTGGTGCTGAAGGTGATGATCAATATAGCAACATCACTCTACTGGGCGGTAGTGGAAACAATGATAATGTTGTTAGTATTACATTTGCTGGTGGAGGATTTAGCGAAACCACTATTCAACAATATGGTACTGGTTATCAAGTAGGTGATGTTCTTACTCTACCAACATCTCAAACTGGTGTTACTGGTACAGCAACAGAAGATCAAAACACAGTAGCAGTTTCCAGTGTTACTGGAATTGTTGAGGGTATGGTGTTCACCCAAACTGGTGGCACTGCAGTTTTTGCAACTCCAACTGATATTGATGATAACCCAACTGATATTCTTGTTACTGGTGTTGACGGAGAGAACAACGAAATCCAACTAAACACCACTGCTACTACTGCTGGAACTGCAACCTTTACGTTGACCGTTCCTTGGGGAGATGCTGGTAGCGGATATCAATATACTATTACTAAAGTTGGCGTCATTACTCAAGTTTCAGTTAATAACCCTGGTAATGGTTATGCTGATGATGACGTACTGACAGTAAATCCACTTGATCTGACAGCATTTATTGATTACACAGTAACCACGATTGATGGTCAAGTAATTAATTTCTCTCCAGCAATTTCTGGTAGTGCTTTCAGTGTAGGACAAACCGTCAGTACAGTTGACCCATCAGATAGTGAAGCGATTCCTGCATCTGGCGAGGTATTAGAAGTCACTACATCTGGTGGTTCCATCACAAGTATCTTAGTTGCATTTGAAGAAGGAAGTAGTGATGCTGGTTATAACATTACTGGTAATGGTACTTACACAGTAGATTCTGTAGATAATGCAGCCAGATATCAAATTGATACTACCGAGGATCAAAGCAATCCACAGTTATATCCACAGTTAACTCTATATAAAGACAACAAATATAGATTTGATGTTTCTAACATCGGATCTCACCCATTCAGATTTAGTGTTCACCAAGATGGTATTCATGCTGGATTTACTGAAACCCTAACTCTCAGTGATTCTTCCACCACTATCACGGTATCAGATTCTACTGGACTGTTTGTCGGTATGTCTGTTACAACAAATAACAGTGCTGATGAGACAGGTGAATTAGCAGGAGATACCACCATCACAGAAATTGATGGCAACAATATTAACTTGAGTGCTGCACCAATTGCTTCTGGTTCTGCAGTTGTTGTGTTTGCTGGTGTTCTGTATGAGGGTGCTGAAGTTTCTTATGCAGATGATTATGTAATCATCACTCCAACCGATTCCACACCTGCTACTCTATACTACTATTGCAATGTACACCCAAATATGGGTGGAACAGGATCACTGACTATTAATTATAATAACCCCAAAACTTTTGGTACTGGATTTGAAGTTCTGGCATTTGAAGTAGAAGAGGTTGATGTTATTACTGGTACTGTTGCTAGTGGTGACTTTAACGTTGCTTCTATCACTGGTACTGGAGTAAATGTAGAAACTATTACAACAACAGATATTACTGGTGATGAGGGAGAATTCACACGAACAGTAACACCAGAACTTGCGTTAGAAGTAAATGCAGACAAAACAACTCTAACTTCCATCACTGCTTTGGGTGGAGAAATTATTCTCACTGGTACATCATTATCGCTTGGTGATAATTTTACAGTCAATGGAGACACTGGTACTCTTAACACTAATGGTATTCTCAAGACTACTAACAAACTTAATATCAATGATGTTCTGAATATCGTTGATGATACTATTTCTGCTACTACAAACAATAGTATCTTTATTGTTCCTGCTGCTGGTAAGATTACTAAGATTGATTCTACCACAGCACTAGTTATTCCTAAAGGTGACACTTCTGGAAGACCTCTTACAGGGCAGGTACAAGACGGTGCAATCCGCTTTAACACCGAAACGAACCAATATGAAGGATACAGCGAAACAACGTCTTCCTGGTCCTCTCTGGGCGGTGTTAGAGACCTTGACGGCAACACATACATCGATGCAGAAGCATTCCCAGGTGCAAATGACAACACACTGTACTTCTATAACGATAACGTCAACACATTACAGGTAACAAGAAACTTCTTAGACTTTAGAAACACTAAAAAGATTAGATCTGCAAACACCACCGCACCAACATATACAGAGTGGTTTGCAAATATTCCTGTAACGGTTACTACACCCACCACAAAACTCAAGTACAGAAACAACATCTATGAGGTTGTCGGTGCTGGTGTCACTGCTACATCTGGTAATGAACCAAATGATACTAGTGGAGACCCATTTGTTAATGGTACTGCAACTCTACAGTGGATTGCTACTGCTGTAGATGCTCTAACATTCCAAGAAATTTCTGAAGTTCGTATTGACCCATTTGGAGATACTCCACTCGTTGTCAGTGGAGAACTTCGTTTCCTTGGAAATGTAATTTCTACAGACATCAATGACTTAATTATTAGACCAAACTCTGGTAAGAAAGTTTCTATTGATGCAGCAAGTTCTTTAAAAATTCCTGTTGGAGATAACAATCAAAGAGGTGCTGCAGTAACTGGTTCGATTAGATTTAACACAGACATCCTTCAATATGAAGGTTATGATGGAAACAACTGGTCTTCTCTTGGTGGTGTTCGTGACGTTGATGGTAACACGTACATCATCCCAGAAACTGCTCCTGGCGAAAACGAGAACACTTTGTTCTTCTACAACAACGGTGTAAACACGGTTAGAGTTACTGAGAATGAATTTATCTTTGATGGCATTGAAGATGTATTCTCCTCCACAACAGATAATCTGAATGTTAATATTGAAAGTCTGACATTCGAGAATGGTGCTCTGGTTCTAGAGCATAGTGATATCACTCAGACTTATCTCTATACCACCAGAGAGCACTTTGACATTGGTATGTCGCAAGGTCTTACAATTGACAAGTTTTTGAGACTATCTGATACAGGTGATATTAAATACAATGTTAACTTCCCAAATGGTGGTGGAGTTCCAGATTTCTTGACCATGGTTAGTGGAGATTTGAAAACAGTTGAGTTTGCTGATGTTAGAATCAAATCTGCTGTCGCAACTCTTGTAAAGGGAACAAATGATGTTTTCGGTACTGAAATTTATACAACTACAGACAAGGGAGCAAGAGTTTTAATTACCATTGAAAATACCACGTTAAATCAGAAAGAGCAAGTTGAACTTTCTGTTATAGATAATGGTACAGATATTGTATACACTGATTACGGTAATATCAAGACTGGAATTGATTTGTTTACAGCATCATTTGATTATAATGCATTAAACAATGTTAGAGTTAATGTAACTCTACATCCAGATCTAAATCTCGGAAACTCTTGTAATGTAACAATCACCAGTTATGTAAATAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a0feea6845cbc6c4586bca34e9b337f8c66d6fc50d03d9c889f90bffd7a763b1
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8441
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50