Protein

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Genbank accession
AGR48333.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MHIKNFRQYTPENPDVPGAMYLKSEDGQDWYECQSLFSAETLKVVYNSAGVITGIGRVASVLWPVNQSVVEVADTEENRKADISGRWGFDGEKITDLLTAEKARGMKGDEINAWRNAMEAANYTFEHNGRKWDYGKSTQTRLEPSVAAAKAGKLPEAFFWTDAENNDVEVTAEELIALSEAAEQAMFTKGMEIHVRQRTMKKELEKLTSADEILAYRVGWAQE
Physico‐chemical
properties
protein length:223 AA
molecular weight: 25092,75780 Da
isoelectric point:4,91381
aromaticity:0,09417
hydropathy:-0,57444

Domains

Domains [InterPro]
DC_1606
STR
1–218
DC_1606
IPR025484
STR
104–211
IPR025484
AGR48333.1
1 223
Architecture
STR
STR 1-218 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage 1720a-02
[NCBI] 		1115653 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGR48333.1 [NCBI]
Genbank nucleotide accession
KF030445.1 [NCBI]
CDS location
range 1871 -> 2542
strand -
CDS
ATGCACATAAAGAATTTCAGACAATACACGCCGGAAAATCCGGATGTGCCGGGTGCGATGTACCTGAAATCAGAGGATGGTCAGGACTGGTATGAGTGTCAGTCGTTATTTTCAGCAGAGACGCTGAAGGTGGTTTATAACAGTGCCGGGGTCATTACCGGCATCGGCAGGGTGGCATCAGTTCTGTGGCCTGTGAACCAGAGTGTGGTGGAGGTGGCGGATACGGAAGAAAACCGCAAAGCTGACATCTCGGGGCGCTGGGGTTTTGACGGGGAGAAAATCACGGACCTGCTGACCGCGGAGAAAGCGCGAGGGATGAAGGGCGATGAAATTAACGCCTGGCGTAATGCGATGGAAGCGGCGAACTACACGTTTGAGCACAATGGGCGTAAATGGGACTACGGGAAGTCAACGCAGACGCGTCTTGAGCCATCGGTGGCGGCAGCGAAAGCGGGGAAACTGCCGGAGGCGTTTTTCTGGACGGATGCGGAAAACAATGATGTGGAAGTGACAGCAGAAGAGCTTATAGCGCTGAGTGAAGCGGCAGAGCAGGCGATGTTCACCAAAGGGATGGAAATCCACGTTCGCCAGCGCACCATGAAGAAAGAGCTGGAAAAGCTGACCAGTGCGGATGAGATACTGGCATACAGGGTTGGCTGGGCACAGGAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
7dff54c51f68955f2a9b23dcb60fd7eea9f7b73eff1e360e48ba2a63196a710f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9674
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophage sequence of genetically marked E. coli phage Phi1720a-02 containing a deletion in the stx2dact Shiga toxin gene Osburne,M.S., Tai,A. and Leong,J. 2021 — GenBank