Protein

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Genbank accession
AHK11871.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MANKVKTIQVKRGTKAKSDVITHKLAEPIFTTDTKELYFGDGVTPGGIPVGTVKSTGVVVADMLALFKDSTGKLLYGLTKADFLQGYATEQHVTDAITNSVPTIKVNRATLADTATNAEKLKNREDWLNVDNLTASYQEDSTSKVVTAAGIKLMWDTINAGKIAVTSITSSLTDTSVTKVLSAAAGKALKDAQDIIKTTATSALSTANSALQKATANGVHLGKLPPSVTKGTAAPVNGTGVDGDVYLQYT
Physico‐chemical
properties
protein length:250 AA
molecular weight: 26134,37960 Da
isoelectric point:9,04712
aromaticity:0,04800
hydropathy:-0,10120

Domains

Domains [InterPro]
DC_0435
ATT
1–50
DC_0435
G3DSA:2.10.10.30
ATT
5–55
G3DSA:2.10.10.30
IPR041352
ATT
8–44
IPR041352
AHK11871.1
1 250
Architecture
ATT
ATT 1-55 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage CHOED
[NCBI] 		1458716 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio anguillarum
[NCBI] 		55601 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AHK11871.1 [NCBI]
Genbank nucleotide accession
KJ192399 [NCBI]
CDS location
range 10127 -> 10879
strand +
CDS
ATGGCAAATAAAGTCAAAACAATACAAGTTAAGAGAGGGACTAAAGCTAAGAGTGATGTGATTACTCATAAGCTTGCAGAACCTATCTTCACCACCGATACAAAGGAATTGTATTTTGGTGACGGGGTGACTCCCGGTGGTATCCCAGTCGGTACTGTTAAGTCAACAGGTGTAGTCGTAGCAGACATGTTAGCTCTATTTAAGGACTCTACAGGGAAACTGCTATATGGACTCACTAAAGCCGATTTTCTACAAGGCTATGCTACTGAACAGCACGTTACTGACGCTATTACTAATTCTGTTCCTACTATAAAAGTAAACAGAGCTACCTTAGCAGATACAGCAACTAATGCTGAGAAACTAAAGAACCGTGAGGATTGGTTGAATGTTGATAACTTAACCGCTTCGTATCAGGAAGATTCGACAAGTAAAGTAGTTACAGCGGCAGGTATTAAGTTGATGTGGGATACTATCAATGCAGGTAAAATAGCAGTGACCAGTATTACTTCTTCATTGACTGATACATCCGTTACTAAGGTACTCTCAGCAGCCGCAGGGAAAGCCCTGAAGGACGCACAGGATATCATTAAGACAACCGCTACCTCAGCTCTATCAACAGCTAATTCAGCTCTACAGAAAGCCACAGCTAATGGAGTACATCTAGGTAAATTACCTCCTAGTGTTACCAAAGGTACAGCAGCTCCTGTAAACGGGACAGGTGTTGATGGTGATGTTTATTTACAATACACCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
785a48b5d7bda81c11d39c3b96500d0b123033b1e034cf287e1de04684f631b2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7682
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Vibrio anguillarum bacteriophage CHOED of the family Podoviridae, successfully used for phage therapy in aquaculture Romero,J., Gajardo,F., Higuera,G., Castillo,D., Middleboe,M., Garcia,K., Ramirez,C. and Espejo,R. 2014-08-28 — GenBank