Protein

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Genbank accession
YP_009807867.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
Protein sequence
MADTDLYSVNIFPGNGTQTNFEISFAGGYISREHVKAYLRIGQGAETPVSLEWMDDNVVRYTPAPPLNSVLVVYRETPKDKPLADFSNGAVLTESSLDINAKQAVFIAAEAQDNGTERITNVEKQSIKSVNGGLVGSGFVVVGSDGVASGQDFLNIVKTATPVADDGAWGSAFADDGVWG
Physico‐chemical
properties
protein length:180 AA
molecular weight: 19048,85870 Da
isoelectric point:4,33428
aromaticity:0,08889
hydropathy:-0,11333

Domains

Domains [InterPro]
DC_0245
STR
1–178
DC_0245
IPR005604
ATT
6–120
IPR005604
YP_009807867.1
1 180
Architecture
ATT
STR
ATT 1-120 | STR 121-178 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Sphingomonas phage Scott
[NCBI] 		2282912 Uroviricota > Caudoviricetes > Autographivirales > Scottvirus > Scottvirus scott
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009807867.1 [NCBI]
Genbank nucleotide accession
NC_048029.1 [NCBI]
CDS location
range 14275 -> 14817
strand -
CDS
ATGGCTGATACAGACCTGTACAGCGTTAACATCTTCCCCGGTAACGGGACGCAGACTAACTTTGAAATTAGTTTTGCTGGCGGTTATATCAGTCGGGAACACGTTAAGGCATACTTGCGTATTGGGCAGGGTGCAGAGACGCCGGTGAGTTTGGAATGGATGGACGACAATGTTGTTCGCTATACTCCGGCACCGCCTCTTAATTCTGTCTTGGTAGTCTATAGAGAGACTCCTAAAGATAAGCCTCTGGCAGATTTCAGTAACGGCGCTGTCCTAACGGAGAGCAGCCTTGATATCAATGCCAAACAGGCAGTGTTCATTGCCGCCGAGGCCCAAGACAATGGAACCGAACGCATTACTAACGTCGAGAAGCAGTCTATCAAGTCTGTAAACGGCGGTTTAGTAGGGAGCGGGTTCGTCGTCGTAGGTTCCGACGGTGTTGCCTCCGGGCAAGATTTTCTTAACATAGTCAAAACTGCGACCCCGGTAGCCGACGATGGCGCTTGGGGTTCGGCTTTTGCAGATGATGGAGTGTGGGGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d4793d26e216a04cb92e620cd4ccf8b6e4168d4e1bbf3879aec026a78c825c3e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8058
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Relating species composition and interactions to biofilm formation in a model drinking water community Thompson,A., English,E.L., Willsey,G., Nock,A.M., Eckstrom,K., Tighe,S.W., Bavelock,M., Cairns,B., Foote,A., Schulman,H., Gupta,S., Kadouri,D. and Wargo,M.J. 2020-01-01 — GenBank