Protein

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Genbank accession
AGC35502.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MANVIKTVLTYQLDGSNRDFNIPFEYLARKFVVVTLIGVDRKVLTINADYRFATRTTISLTKAWGPADGYTTIELRRVTSTTDRLVDFTDGSILRAYDLNVAQIQTMHVAEEARDLTADTIGVNNDGHLDARGRRIVNLANAVDDRDAVPFGQLKTMNQNSWQARNEALQFRNEAETFRNQTEVFKNESGTNATNTKQWRDEANGSRDEAEQFKNTAGQYATSAGNSATAAHQSEVNAENSATAAANSANLAEQHADRAEREADKLGNFNGLAGAIDRVDGTNVYWKGGIHANGRLYLTSDGFDCGQYQQFFGGSAGRYSVMEWGDENGWLMYVQRREWTTAIGDNIQLLVNGHIIAQGGDMTGPLKLQNGHALYLESASDKAQYILSKDGNRNNWYIGRGSDNNNDCTFHSYVYGTNLTLKPDYAVVNKRFHVGQAVVATDGNIQGTKWGGKWLDAYLNDTYVKKTKAWTQVWAAAGGSYMGGGSQTDTLPQDLRFRNIWIKTRNNYWNFFRTGPDGIYFLLAEGGWLKFQIHSNGRVFKNISDRDAPPTAIAVEDV
Physico‐chemical
properties
protein length:558 AA
molecular weight: 62063,77710 Da
isoelectric point:5,98540
aromaticity:0,10573
hydropathy:-0,56935

Domains

Domains [InterPro]
IPR005604
ATT
1–131
IPR005604 Coil G3DSA:6.20.80.10 G3DSA:6.20.70.20 G3DSA:2.60.320.30
DC_0264
STR
1–556
DC_0264
IPR048388
ATT
371–463
IPR048388 IPR022246
AGC35502.1
1 558
Architecture
ATT
STR
ATT
STR
ATT 1-131 | STR 132-370 | ATT 371-463 | STR 464-556 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage Y
[NCBI] 		1176434 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGC35502.1 [NCBI]
Genbank nucleotide accession
JQ957925.1 [NCBI]
CDS location
range 31867 -> 33543
strand +
CDS
ATGGCTAACGTAATTAAAACCGTTTTGACTTACCAGTTAGATGGCTCCAATCGTGATTTTAATATCCCGTTTGAGTATTTAGCCCGTAAGTTCGTAGTAGTAACCCTTATTGGCGTAGACCGCAAGGTCCTTACGATTAATGCAGACTACCGTTTTGCTACGCGTACTACCATCTCACTTACCAAGGCTTGGGGTCCAGCGGATGGATACACTACCATCGAGTTACGCCGAGTAACCTCCACAACCGACCGATTGGTTGACTTTACGGATGGTTCAATCCTCCGTGCGTATGACCTTAACGTCGCTCAGATTCAAACGATGCACGTAGCGGAAGAGGCCCGTGACCTCACTGCTGATACCATAGGTGTCAATAATGATGGTCATTTGGATGCTCGTGGTCGTCGAATTGTTAACCTAGCGAACGCTGTGGATGACCGCGACGCTGTTCCGTTTGGTCAACTTAAGACCATGAACCAGAACTCGTGGCAGGCGCGTAATGAGGCACTACAGTTCCGTAATGAGGCTGAGACTTTCAGAAATCAAACGGAGGTTTTTAAGAATGAGTCCGGTACTAACGCTACGAACACAAAGCAGTGGCGAGATGAGGCTAATGGGTCCCGAGATGAAGCCGAGCAGTTCAAGAATACGGCTGGTCAATACGCTACATCTGCTGGGAACTCTGCTACTGCTGCGCATCAATCTGAGGTAAACGCTGAGAACTCCGCTACAGCAGCAGCGAACTCTGCGAATTTGGCAGAACAACACGCAGACCGTGCGGAACGTGAAGCAGACAAGCTGGGGAATTTTAATGGACTGGCTGGTGCAATTGACAGGGTGGATGGAACCAATGTGTACTGGAAAGGAGGTATCCATGCGAACGGACGCCTTTACCTTACCTCAGATGGTTTCGACTGTGGTCAGTATCAACAGTTCTTTGGTGGTTCTGCTGGTCGTTACTCTGTCATGGAGTGGGGTGATGAGAACGGATGGCTGATGTATGTTCAACGTAGAGAGTGGACAACAGCGATAGGTGATAACATCCAGCTATTAGTAAACGGACATATCATCGCCCAAGGTGGAGACATGACTGGTCCGCTGAAATTGCAGAATGGACATGCCCTTTACTTAGAGTCCGCATCCGACAAGGCGCAATATATTCTATCTAAAGATGGTAACAGAAACAACTGGTACATTGGTAGAGGATCAGATAACAACAATGACTGTACCTTCCACTCCTATGTGTATGGTACGAACTTAACACTCAAGCCGGACTATGCAGTAGTTAACAAACGCTTCCACGTAGGTCAGGCAGTTGTAGCCACTGATGGTAATATTCAAGGTACTAAGTGGGGAGGTAAGTGGCTTGATGCTTACCTAAACGATACTTACGTTAAGAAGACAAAGGCCTGGACTCAAGTATGGGCTGCTGCTGGAGGTAGTTACATGGGAGGAGGTTCTCAGACTGATACTCTCCCACAGGACTTGCGATTCCGCAACATATGGATTAAGACCAGAAACAACTATTGGAACTTCTTCCGAACTGGTCCTGACGGTATCTACTTCCTTTTAGCCGAGGGCGGTTGGCTAAAATTCCAGATACACTCTAATGGCAGGGTATTTAAGAACATATCGGATAGAGATGCGCCTCCAACAGCAATAGCCGTAGAGGACGTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b52688302df2559fdf274b7d94dc047f197964ad1e9e2f0a9cfa4c768bc7f388
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7278
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic Characterization of Yersinia pestis Bacteriophage Y and Comparison to the Closely Related typing phage phiA1122 Cox,C.R. and Voorhees,K.J. 1990-04 — GenBank