Protein

View in Explore
Genbank accession
AXQ62673.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MKLTLKRIFKGPKYTIGKLYVNGVYECDTLEDTDRGLHETQSLLEIQSKKVYGQTAIPYGTYKIDMNTVSPKFKDRSWAKFCGGKLPRLIDVKGYEGVLIHVGNKAEDTLGCILVGENKIKGQVINSTATFQELYSVMLKAKLLGEELSLTIE
Physico‐chemical
properties
protein length:153 AA
molecular weight: 17139,75840 Da
isoelectric point:8,85952
aromaticity:0,08497
hydropathy:-0,24183

Domains

Domains [InterPro]
IPR043732
STR
4–138
IPR043732
AXQ62673.1
1 153
Architecture
STR
STR 4-138 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacteroides phage crAss001
[NCBI] 		2301731 Uroviricota > Caudoviricetes > Crassvirales > Asinivirinae > Kehishuvirus
Host Bacteroides intestinalis
[NCBI] 		329854 cellular organisms > Bacteria > Pseudomonadati > FCB group > Bacteroidota/Chlorobiota group > Bacteroidota

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXQ62673.1 [NCBI]
Genbank nucleotide accession
MH675552.1 [NCBI]
CDS location
range 26404 -> 26865
strand +
CDS
ATGAAACTAACACTAAAAAGAATATTCAAAGGACCTAAATATACTATAGGTAAACTCTATGTAAATGGAGTTTATGAATGTGATACTCTTGAAGATACTGACAGAGGTCTCCATGAAACACAATCTCTTCTGGAGATACAGAGTAAGAAGGTCTATGGGCAGACAGCAATTCCTTATGGAACTTACAAGATTGATATGAACACTGTAAGCCCCAAATTCAAGGATAGGTCATGGGCTAAATTCTGTGGAGGAAAGTTACCCAGACTTATAGATGTGAAAGGTTATGAGGGGGTACTAATCCATGTTGGTAATAAAGCTGAGGATACATTAGGTTGTATCCTTGTGGGAGAGAATAAGATAAAAGGACAAGTTATTAATAGCACAGCTACCTTTCAGGAGTTATATTCAGTAATGCTGAAAGCAAAACTCCTTGGAGAGGAACTTAGTTTAACAATAGAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
cd1008d3ab1046194bbefee1ef293b809f28f12fd90eceff2966017dd8ea16ad
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9757
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
PhiCrAss001, a member of the most abundant bacteriophage family in the human gut, infects Bacteroides Shkoporov,A.N., Khokhlova,E.V., Fitzgerald,C.B., Stockdale,S.R., Draper,L.A., Ross,R.P. and Hill,C. 2018-06-26 — GenBank