Protein

View in Explore
Genbank accession
AXN57968.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MTSRNVVSGVSFWYSKQTYDLSKKGVVAYKPLLSGSGFESLFEDLNVGNSYYAMMFGGQTPTNIGSSSKIVIRNIVGAPIGRGLSLDRCLDIPRISDIHWNYNIYLGKENEYAQDLKQWIFDNATGFHFGRVDFAAAFRLFCFGYKIAYYFRSERYNGSSDSFRLVECDADICSRPIFAQNYGGVFVVDGGKFTGASAGTLGLVETDLSGCLFYQTSPASQVVLNNATFNNLSGDAISFGSHIRVSNCKFYNVGKAGTQRAVFRARSGANSDVHLQGVEIQLSLDNSRGVWSDDSTGTLTMSGGTTITGVGFEGYRWAGGGKVTIDSTCRVDIRSRSSGSWHTTANSVLFSEQMPTVGSFYKAGDFVFSSKPTALGLTTPANYAVIGWSRATNSNADGTNHAVNVDWFEVKAFIDQVARSIPMSGQTRPTTGPEGMIFFDKVLGIPICLKSNSPMSWIKMDGTPA
Physico‐chemical
properties
protein length:465 AA
molecular weight: 50532,14620 Da
isoelectric point:8,30915
aromaticity:0,12258
hydropathy:-0,12839

Domains

Domains [InterPro]
DC_2129
STR
4–425
DC_2129
IPR011050
STR
159–322
IPR011050
IPR012332
STR
174–419
IPR012332
AXN57968.1
1 465
Architecture
STR
STR 4-425 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AXN57968.1
1 465
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0033
Central domain 11 347 338 0,9912
C-terminal 348 465 117 0,9870
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-347
C-terminal
348-465

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage ABPH49
[NCBI] 		2282400 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Acinetobacter baumannii
[NCBI] 		470 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXN57968.1 [NCBI]
Genbank nucleotide accession
MH533020.1 [NCBI]
CDS location
range 141074 -> 142471
strand -
CDS
ATGACGTCCAGAAACGTAGTTTCTGGGGTGAGCTTCTGGTATTCGAAGCAGACTTATGACCTATCTAAAAAGGGAGTGGTTGCGTACAAACCTCTGCTCTCTGGGTCTGGATTTGAATCACTCTTCGAGGACCTGAACGTAGGAAATTCATACTACGCCATGATGTTTGGTGGTCAGACACCTACAAATATCGGTAGTTCCAGTAAGATAGTTATACGTAACATTGTTGGCGCTCCAATAGGTCGAGGGTTGTCTCTTGACAGGTGTCTAGATATCCCAAGGATTTCAGACATACACTGGAATTACAACATCTACCTCGGGAAGGAAAATGAATACGCTCAGGACTTGAAGCAGTGGATTTTTGATAACGCCACAGGATTTCATTTCGGCAGGGTAGACTTCGCGGCGGCGTTCAGGTTATTTTGTTTCGGATACAAGATTGCCTACTACTTCCGGTCGGAGAGATACAATGGGTCGTCCGATTCTTTCCGTTTGGTAGAGTGTGATGCAGATATCTGTAGTCGCCCGATATTTGCCCAGAACTACGGTGGGGTTTTTGTAGTTGATGGGGGTAAATTCACAGGTGCTTCGGCAGGAACATTAGGCCTTGTGGAGACGGACTTGAGTGGATGTCTGTTTTATCAGACCTCTCCAGCATCTCAGGTGGTATTGAACAATGCAACGTTCAATAACCTATCGGGAGATGCCATCAGTTTCGGCAGTCATATCCGGGTAAGCAACTGCAAGTTTTACAACGTCGGTAAGGCAGGTACACAGCGTGCGGTATTTAGGGCCAGATCTGGTGCTAACTCCGATGTACACCTACAGGGCGTTGAGATACAGCTCAGCCTTGACAACTCAAGAGGGGTGTGGTCAGACGACTCAACAGGTACACTGACGATGTCTGGCGGAACAACGATAACAGGTGTTGGATTTGAGGGGTACAGATGGGCAGGTGGTGGCAAAGTAACAATAGACAGCACCTGCCGTGTCGACATTCGGTCAAGAAGCTCCGGCTCTTGGCATACGACAGCTAATTCAGTCTTGTTCTCTGAACAAATGCCAACTGTCGGATCGTTTTATAAGGCTGGGGATTTCGTGTTCAGCTCAAAACCTACAGCCTTGGGGCTAACAACCCCGGCCAACTACGCGGTGATCGGTTGGTCTAGAGCGACAAACTCCAATGCAGATGGGACAAACCATGCGGTAAATGTGGACTGGTTTGAGGTGAAGGCCTTTATAGACCAAGTTGCAAGGTCTATCCCGATGTCTGGACAAACTAGACCGACAACGGGACCCGAGGGAATGATTTTCTTCGACAAAGTGCTTGGCATCCCAATCTGCCTAAAATCTAACAGTCCAATGTCTTGGATAAAGATGGATGGCACACCAGCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2c7d821160884f1af018173ce46e7a173ec124e20877453abf9506f65663bf8b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7831
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and complete genome sequence analysis of a bacteriophage infecting Acinetobacter spp. isolates Yang,C., Qiu,S. and Song,H. 2019-03-21 — GenBank