Protein

View in Explore
Genbank accession
QYC95368.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,61
Protein sequence
MGLEVATYINQLVPTNPTGSDLKSFGDDHIRLIKSAIKNTFPNINQAVTVTASQLNSVADTTQYVKPGMVIMWAGTLAQIPAGWKLCNGVGTTSNGIPVPNLIGAFPWGIDGTSQTVGTRGGNANIVWEGLTEGHALTLAQIPAHTHTWRTRGATTLTGSAGDSGALTGGSGNAANTNLETGSAGQGRAHTHAVKINMPLGNIPPFCAVFFIIKN
Physico‐chemical
properties
protein length:215 AA
molecular weight: 22271,92530 Da
isoelectric point:8,66579
aromaticity:0,06047
hydropathy:-0,01581

Domains

Domains [InterPro]
DC_2164
STR
3–215
DC_2164
SSF88874
STR
61–214
SSF88874
QYC95368.1
1 215
Architecture
STR
STR 3-215
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PhL_UNISO_PA-DSM_ph0041x
[NCBI] 		2812901 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QYC95368.1 [NCBI]
Genbank nucleotide accession
MW526260 [NCBI]
CDS location
range 11742 -> 12389
strand +
CDS
ATGGGTCTTGAGGTCGCAACGTATATCAATCAGTTGGTGCCTACGAACCCTACCGGCTCTGATCTGAAGTCCTTTGGGGATGACCATATTCGCCTCATCAAGAGTGCCATTAAGAATACCTTCCCCAATATTAACCAAGCTGTCACCGTAACAGCATCCCAATTGAACTCAGTCGCAGATACCACCCAATATGTGAAACCTGGGATGGTTATCATGTGGGCGGGTACTCTTGCTCAGATCCCAGCAGGTTGGAAACTTTGTAATGGCGTAGGGACAACCTCTAATGGCATCCCCGTACCTAACCTCATCGGAGCATTCCCTTGGGGTATTGATGGTACATCCCAAACTGTAGGTACTCGGGGTGGTAACGCTAACATCGTATGGGAAGGTCTTACCGAGGGCCACGCTCTTACGCTAGCCCAAATACCAGCACACACTCACACTTGGCGTACCCGAGGGGCTACCACCCTGACTGGTTCTGCTGGTGATTCTGGTGCGTTGACTGGTGGTTCTGGTAACGCTGCCAATACCAACCTAGAGACTGGCTCTGCTGGTCAAGGACGGGCACACACCCACGCTGTTAAGATCAACATGCCATTGGGCAACATCCCGCCGTTCTGTGCTGTATTCTTCATTATTAAGAACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
c864a580e00533a6b1be7ed6612594660afb54e693116672ae44e92a1c33f30e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7583
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of lytic bacteriophages for Pseudomonas aeruginosa Rossi,F.N., Setubal,J.C., da Silva,A.M. and Balcao,V.M. 2022-01 — GenBank