Protein

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Genbank accession
WBF05216.1 [GenBank]
Protein name
tail fiber protein 2
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,63
TF
Evidence RBPdetect2
Probability 0,64
Protein sequence
MALKLANNAVSKLAGTLATGGTSLALTPGDGAKFPALGAGDWFPLTVIKSDGTFEVMRCTARATDTLTVTRAQEGTAALAFAAGDRVELRFTALAAFSLPYLPLSGGGSVTGPVSIDAGEGAATLLLPAATAGVEIGSTVKAGTPFIDFHSSGNNIDYDARIQAFGGSAANGQGGLNLYAAGGVFAIGGGFCLNNGQYYSGKLINGSIARLMGVESLANHVDIVNAGGAKVRFINQAYSAELGSFDNAGNFVAAGNLSGYSDRRLKSNIKRIKGAMAKVRELVGVTFTRRRSKDKTRHMGFIAQDVEKVVPEVVRTDEKGVKMIAYPNLTALLAEALKELDDRVAVLEEARQ
Physico‐chemical
properties
protein length:352 AA
molecular weight: 36512,09720 Da
isoelectric point:8,95177
aromaticity:0,07102
hydropathy:0,07472

Domains

Domains [InterPro]
DC_1952
STR
1–345
DC_1952
IPR030392
CHP
261–315
IPR030392
IPR030392
CHP
261–351
IPR030392
WBF05216.1
1 352
Architecture
STR
STR 1-351 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Burkholderia phage CSP3
[NCBI] 		3017166 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Burkholderia contaminans
[NCBI] 		488447 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WBF05216.1 [NCBI]
Genbank nucleotide accession
OQ053201.1 [NCBI]
CDS location
range 18327 -> 19385
strand +
CDS
ATGGCACTCAAACTCGCGAACAACGCGGTCAGCAAACTCGCCGGCACTCTCGCGACTGGCGGGACGAGTCTTGCTCTCACGCCGGGCGACGGCGCGAAGTTCCCGGCGCTGGGTGCTGGCGACTGGTTTCCGCTGACGGTCATCAAGAGCGACGGCACGTTCGAGGTTATGCGCTGCACGGCACGCGCAACGGACACGCTGACCGTCACGCGGGCGCAGGAAGGCACGGCCGCGCTTGCGTTCGCTGCCGGCGATCGCGTCGAGCTGCGGTTCACGGCGCTTGCGGCGTTCAGCCTGCCGTATCTGCCGCTCTCGGGCGGCGGCTCGGTGACTGGTCCGGTTTCTATCGACGCAGGCGAAGGTGCCGCGACGCTTCTGTTGCCTGCTGCAACGGCGGGAGTTGAAATCGGTTCGACGGTCAAGGCCGGCACGCCGTTTATCGATTTTCACTCGTCTGGAAACAACATCGACTATGACGCTCGCATTCAAGCCTTTGGCGGCTCTGCGGCGAACGGCCAAGGCGGCCTGAACCTCTATGCCGCCGGCGGGGTTTTCGCCATTGGTGGCGGCTTCTGCCTCAATAACGGCCAGTACTACAGCGGCAAGCTCATCAACGGGTCAATCGCACGGTTGATGGGCGTCGAATCGCTTGCCAACCATGTGGACATCGTTAATGCCGGCGGGGCGAAAGTCCGCTTCATCAATCAGGCGTACAGCGCAGAGCTCGGCTCGTTCGACAACGCCGGCAACTTCGTCGCGGCCGGAAACCTCAGCGGCTATTCCGATCGCCGCCTGAAGTCCAACATCAAGCGCATCAAGGGCGCGATGGCGAAGGTTCGCGAGCTGGTCGGCGTGACCTTCACGCGCCGGCGCTCGAAGGACAAGACGCGTCACATGGGCTTCATCGCCCAGGACGTCGAGAAGGTCGTGCCCGAGGTCGTGCGCACCGACGAGAAGGGCGTCAAGATGATCGCTTATCCGAACCTGACGGCGCTCCTCGCCGAGGCGCTGAAGGAGCTCGACGATCGCGTCGCGGTGCTGGAGGAGGCACGCCAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
a8ae05c39f2889e8a1323b7c2edef9f33a904e28730a01c686ac6518da92d9c4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8009
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Burkholderia contaminans bacteriophage CSP3 requires O-antigen polysaccharide for infection Stanton,C., Batinovic,S. and Petrovski,S. 2023-06-15 — GenBank