Protein

View in Explore
Genbank accession
XBA92469.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MSVVISGALIDGAGIPMSGCHIILKSRVNTSEVVMRTVADVVTGNCGEYCFKAQTGKYCVYLKQDWRDEYCVGDIAVYDDSKPGTLNDFLTALDEGDLKPDVVKRFEEMVAQAQQSAEAAAESERQAGQHVADAQKIKGDCQTLADNVQQNAESVAEDKKQVALLASSATQNAARAEQAVKDADKIVQKAVDKLADAATLTGEAKASAESAAKSEQNAKQHRDEAQRIVDELKGTNASTTQKGLVQLCSDTDNDSEELAATPKAVKTVMDETKTKAPLDSPAFTGTPTTPTPPDDAVGLETANAAFVRKLLAALVDSSPEALDTLNELAAALGNDPNFSTTVINALAGKQPLNDVLTAISELSELTQRADNLLYFNQDGNASLSPLSEKARALLVLDTPEAMRTELELKAAATMEAQSDIYDRTAGCLALPGAFGYGHVFSSSEVVYFSAQNGPAEFLKWVFEVTPGRYAVTQYGGSGTSYNPIIAYDMGQPYFRGLVDIDIRYGIDSAGIEAEARRWITFHGDAEYDGGFGEGPAKYQVLVKKSMRPPDLPKAWSRLFWSRNRLMQLLYATENTSMRPPFPGGLVLAAYLPDDGSSEVTLLRAQGVSGSRLRQVVFEAEYRTSGFSAAARSFVYGDTLPGTYVALSGGPDIKFYNRGLVSLFVRVA
Physico‐chemical
properties
protein length:667 AA
molecular weight: 71651,45720 Da
isoelectric point:4,78990
aromaticity:0,07496
hydropathy:-0,25292

Domains

Domains [InterPro]
IPR013609
ATT
1–134
IPR013609 Coil Coil IPR005068
IPR013609
ATT
1–125
IPR013609
DC_0070
STR
93–509
DC_0070
Coil
Unmapped
103–123
Coil
IPR051934
Unmapped
112–360
IPR051934
XBA92469.1
1 667
Architecture
ATT
STR
ATT 1-134 | STR 135-509 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Actinobacillus phage vB_Apl-pPE4
[NCBI] 		3153893 Viruses >
Host Actinobacillus pleuropneumoniae
[NCBI] 		715 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pasteurellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XBA92469.1 [NCBI]
Genbank nucleotide accession
PP818812.1 [NCBI]
CDS location
range 43400 -> 45403
strand +
CDS
ATGTCTGTAGTGATATCAGGTGCGCTGATTGATGGCGCAGGCATCCCCATGTCCGGATGCCACATAATTCTGAAATCCCGGGTAAACACGTCAGAAGTGGTGATGCGCACAGTTGCTGATGTGGTGACAGGAAACTGTGGCGAGTACTGTTTTAAGGCGCAGACCGGAAAATACTGCGTATATCTGAAACAGGACTGGCGCGACGAGTACTGTGTTGGCGACATTGCCGTATACGACGATTCAAAGCCCGGCACGCTGAACGACTTTCTGACTGCCCTTGATGAAGGCGACCTCAAACCCGACGTGGTGAAACGCTTTGAGGAAATGGTGGCACAGGCGCAGCAGAGCGCCGAAGCCGCAGCGGAAAGCGAACGACAGGCCGGGCAACATGTCGCTGATGCGCAGAAGATTAAGGGGGATTGCCAGACGCTGGCGGATAACGTACAGCAGAATGCAGAATCCGTTGCCGAAGATAAAAAGCAGGTGGCGCTGCTGGCATCATCTGCCACACAGAATGCCGCCCGGGCAGAACAGGCGGTCAAAGATGCCGATAAGATAGTCCAGAAAGCGGTCGATAAACTTGCTGATGCTGCAACGCTGACCGGTGAGGCAAAAGCCAGCGCCGAATCGGCTGCAAAAAGCGAGCAGAACGCGAAACAGCACAGGGACGAGGCGCAACGGATAGTTGATGAGCTGAAGGGAACCAACGCCAGCACGACGCAAAAAGGCCTGGTGCAACTCTGTAGTGATACAGACAACGACAGCGAAGAACTGGCAGCCACACCAAAGGCTGTCAAAACCGTCATGGACGAGACGAAAACAAAAGCGCCACTGGACAGCCCGGCGTTCACGGGTACGCCAACCACACCAACCCCACCGGACGATGCAGTCGGTCTGGAAACAGCGAACGCGGCGTTTGTCCGCAAACTGCTCGCCGCACTGGTTGACTCGTCACCGGAAGCCCTGGACACACTGAACGAGCTGGCAGCGGCGCTGGGGAATGACCCGAACTTTTCAACGACGGTCATTAACGCGCTGGCAGGTAAACAACCGTTAAACGATGTGCTGACAGCAATCAGTGAACTCAGTGAACTGACGCAACGGGCAGATAATCTTCTGTACTTTAATCAGGACGGAAATGCTTCACTGTCTCCGCTGTCAGAAAAAGCCCGCGCATTACTGGTACTGGACACGCCTGAAGCCATGCGCACGGAGCTTGAACTGAAAGCAGCTGCAACAATGGAGGCTCAGAGCGATATTTATGACAGAACCGCAGGATGTCTTGCTCTGCCGGGGGCGTTCGGATACGGGCATGTGTTCTCTTCGTCGGAAGTGGTGTATTTCAGCGCCCAAAATGGCCCTGCCGAATTTCTGAAATGGGTGTTCGAAGTCACCCCCGGACGTTACGCGGTAACACAATATGGAGGGAGTGGCACTTCGTATAATCCCATCATTGCGTATGACATGGGGCAACCTTATTTCCGTGGACTTGTGGATATAGACATACGATACGGAATTGACTCTGCCGGTATTGAAGCAGAAGCGCGTCGGTGGATAACGTTTCATGGTGATGCAGAATACGATGGGGGATTCGGTGAAGGTCCTGCGAAATATCAGGTACTGGTTAAAAAATCCATGCGTCCGCCAGACCTACCAAAAGCATGGTCGCGGTTGTTCTGGTCACGTAATCGCCTGATGCAACTGTTGTATGCAACAGAAAATACATCAATGCGTCCTCCGTTCCCCGGAGGCCTGGTTCTTGCTGCATACCTACCGGACGATGGCAGCAGTGAGGTTACGTTACTTCGTGCACAAGGCGTGTCAGGCTCAAGACTCCGGCAGGTGGTCTTTGAAGCGGAGTATCGCACGTCAGGATTTAGTGCTGCTGCGAGGTCATTTGTCTACGGGGATACCCTGCCTGGTACATATGTCGCTTTATCTGGCGGCCCGGATATTAAGTTTTATAACCGGGGCTTAGTTTCTTTGTTTGTGAGGGTTGCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
2ad4560f703671f69f97f260a027f58efd5dd2296e4495def42bb63527c3d5c1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6739
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and complete genome sequence of Actinobacillus phage vB_Apl-pPE42 Assavacheep,P. and Tongmalee,S. 2013-02 — GenBank