Protein

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Genbank accession
CAK25017.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MAQTPSTWADYVGDGVEDTFQVTFPYQKQQEVFVTVGGDPAAFTFISAGWIQLAAVPVNGAAIRVRRSTEAFEPRHEFANGVPLLPRFIDENNTQFLYTVQEAVNETHGIASEALSVAEEARGIAQAASDKVDAATIDSAHQLRLDLADPAKGPGLLGYDRDVSYPVGSVGQSLQFLEMGRVTPAQFGAVGDGASHPLSERYATLAEAQTVYPHAVALSDEIDWAALQAAVDSGAPVHIPSGDYQINRGISSTGSLQIAGDGATSIIRPTAAFTGTSVLSCVGSLVALPNISSVSAGSLTIDFASTPNLVAGDVFIIYNPTDSSFSGFRTSYRAGEFCEVRAVSGNTVTIRSALYAAYDGATVAIYKVVSGVVDIASIQIVGGTVPMNGLLVEAVVSPRVDDVTVTLANNAGVYFARCYDAKITNSNISNIGDGGDDYGIIFGNCHDGGADNCKVYARRHAIATGGDAEVGCVPVRNVRMRNCTLRNDITSGTHCADFHGNAEDCSYENCTIYGGATWQGKDISYRHCTITNASGGWIVISAEILGGTFLLDQCTLYTTGDPQPGNRGVIDVGGNSAVLTTNTTQPCNFLIQGGSLRAPSLSTSSYLLRARLEGSTVPVNIQYSGQAIDVGSLGKVLQLDITSGSTSPEYLIVENLAGLPSGITLASAAGGFASAPMRMPVLGGRVQVTTATNASSVTAPVTFRYIYPKAPTVQVTKTDRSYAGNRVGVAIANPTSASGATLGLFTDDGTNFSSAVTNQLNWQAGIYEV
Physico‐chemical
properties
protein length:769 AA
molecular weight: 80339,64130 Da
isoelectric point:4,76540
aromaticity:0,07802
hydropathy:0,05007

Domains

Domains [InterPro]
IPR005604
ATT
1–108
IPR005604 DC_1709 IPR006626 IPR006626 IPR006626 IPR006626 IPR049350
DC_1263
ATT
1–153
DC_1263 IPR012334 IPR049350
IPR011050
STR
223–546
IPR011050
IPR049350
STR
281–368
IPR049350 IPR054136
CAK25017.1
1 769
Architecture
ATT
STR
ENZ
STR
ATT 1-153 | STR 167-585 | ENZ 586-658 | STR 680-763 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CAK25017.1
1 769
Domain Start End Length (AA) Confidence
N-terminal 1 222 222 0,9945
Central domain 223 663 442 0,9908
C-terminal 664 769 105 0,9800
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-222
Central
223-663
C-terminal
664-769

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage LKA1
[NCBI] 		386793 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAK25017.1 [NCBI]
Genbank nucleotide accession
AM265639 [NCBI]
CDS location
range 35299 -> 37608
strand +
CDS
ATGGCGCAAACACCCAGTACATGGGCCGACTACGTAGGCGACGGCGTAGAGGATACGTTCCAAGTCACATTCCCGTACCAGAAGCAGCAAGAGGTGTTTGTGACTGTGGGCGGCGATCCGGCAGCTTTCACATTCATCTCGGCAGGTTGGATTCAACTGGCAGCGGTCCCGGTAAATGGGGCCGCAATCCGTGTACGGCGCAGCACTGAGGCATTCGAGCCTCGGCACGAGTTCGCCAACGGCGTGCCATTACTGCCGCGATTCATAGACGAGAATAATACCCAGTTCTTGTACACTGTACAAGAGGCAGTGAATGAGACACATGGCATTGCTTCCGAAGCGCTGAGTGTCGCAGAGGAGGCCAGAGGCATTGCGCAGGCGGCATCGGATAAAGTGGATGCTGCCACCATTGACTCCGCACACCAGTTGCGTCTAGACCTCGCCGACCCGGCGAAGGGGCCTGGGCTGCTAGGCTACGACCGAGACGTAAGTTATCCGGTCGGGTCGGTCGGTCAAAGCCTACAGTTTCTGGAAATGGGTCGGGTCACACCAGCGCAATTTGGCGCCGTTGGTGATGGCGCCAGCCACCCCCTCTCTGAGCGATACGCAACTCTAGCGGAAGCTCAGACTGTCTATCCGCATGCAGTCGCACTCTCCGACGAAATAGACTGGGCCGCATTGCAAGCTGCCGTGGATTCAGGGGCACCTGTACACATACCGTCTGGGGACTATCAGATAAATAGGGGGATTAGCAGTACGGGCTCTCTACAGATTGCGGGTGATGGCGCTACATCTATTATACGCCCGACTGCTGCGTTCACTGGTACATCGGTCCTCAGTTGTGTGGGGAGCTTAGTTGCCTTGCCGAATATATCCTCCGTGTCGGCTGGGTCCCTAACCATTGACTTTGCCAGCACCCCTAATCTTGTAGCGGGGGATGTATTCATCATCTACAACCCGACTGATAGCAGCTTCTCGGGATTTCGGACGAGCTATCGCGCAGGAGAGTTCTGTGAGGTCAGGGCGGTTTCTGGGAACACCGTGACAATCCGTTCCGCACTCTATGCCGCATACGACGGGGCTACTGTTGCTATTTACAAAGTAGTCTCTGGTGTAGTTGATATAGCTAGCATCCAAATCGTTGGCGGGACAGTCCCAATGAATGGACTGTTAGTGGAGGCTGTCGTTTCACCGCGCGTCGATGACGTGACGGTCACCCTTGCAAACAACGCCGGTGTGTATTTTGCCCGCTGCTATGACGCTAAGATCACAAACAGTAATATATCGAACATCGGCGACGGTGGCGATGACTATGGAATCATCTTTGGGAACTGTCACGACGGTGGGGCAGACAACTGTAAAGTCTACGCTAGGCGACATGCCATCGCCACGGGCGGCGATGCAGAAGTAGGCTGCGTTCCGGTCCGTAATGTGCGTATGCGTAACTGCACACTTAGGAATGATATTACCTCTGGTACACACTGCGCAGACTTCCACGGTAACGCCGAGGATTGCAGCTACGAAAACTGCACAATCTACGGTGGTGCAACTTGGCAGGGGAAGGATATCAGCTACAGACACTGTACAATCACTAACGCGTCGGGTGGTTGGATTGTTATATCCGCTGAGATTCTTGGTGGTACATTCCTTCTCGACCAATGCACATTGTACACAACCGGCGATCCGCAGCCTGGTAACCGTGGGGTTATAGATGTAGGTGGGAACTCCGCAGTCCTCACTACAAATACAACGCAACCCTGTAACTTCCTTATACAAGGCGGCAGTCTGCGAGCGCCCAGCTTAAGTACGTCTAGTTACCTACTGCGCGCACGTCTTGAGGGTAGTACAGTTCCAGTAAACATACAGTACAGCGGACAGGCTATTGATGTAGGCTCTCTGGGCAAGGTACTACAACTCGATATTACCTCGGGCAGTACCTCTCCTGAGTATTTGATCGTGGAGAATTTAGCGGGGTTGCCATCTGGCATCACGCTGGCGTCTGCTGCTGGTGGTTTCGCAAGTGCCCCGATGCGTATGCCTGTGCTGGGTGGTAGGGTTCAAGTAACTACGGCAACCAACGCGAGTAGCGTTACTGCTCCAGTAACGTTCAGGTACATTTATCCTAAGGCCCCAACCGTCCAGGTCACAAAGACGGACAGGAGCTACGCCGGTAACAGGGTCGGCGTTGCTATCGCCAATCCGACCTCTGCGTCTGGGGCGACGTTGGGTCTGTTCACGGACGACGGGACAAACTTTAGCTCAGCCGTTACTAACCAGTTGAACTGGCAGGCAGGTATTTATGAGGTGTAA

Genome Context

Genome Context

Tertiary structure

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PDB ID
Source
Method
Resolution
Oligomeric State